Gene Shew185_3854 details

Gene Information

• Locus tag: Shew185_3854
• ID: 5369387
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 4572482
• End bp: 4572922
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640832115
• Product: 3-dehydroquinate dehydratase
• Protein accession: YP_001368041
• Protein GI: 153002360
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0757] 3-dehydroquinate dehydratase II
• TIGRFAM ID: [TIGR01088] 3-dehydroquinate dehydratase, type II

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.31735
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCACA AAATTTTGCT CGTCAATGGC CCCAATCTCA ACCTCTTAGG TCGCCGCGAG 
CCCAGCGTTT ATGGTCATCA AACCTTGGCC GACATAGTGG CGGAGTTAAA ACAGCAGGCA 
AAGTTGGCGG AAGTTGAGCT TGAGCATATT CAGTCGAACG CCGAGTTTGA GTTGATCAAC 
GCGATTCATG CGACCGATGC CCAGATGATC ATCATCAACC CCGCCGCCTT TACCCATACT 
AGCGTTGCGC TGCGTGATGC CTTGCTTGGC GTCGCAATTC CGTTCTTTGA AGTGCATTTA 
TCCAATGTGC ACGCCCGTGA AGCCTTCCGT CACCATTCCT ATTTTTCCGA TAAGGCGATA 
GGCGTGATTT GCGGTTTCGG TTCTCAGGGG TATGAGTTTG CACTGGCAGC CGCCATTAAG 
CGGCTCAACC AGCCACAGTA A 

 

Protein sequence

MSHKILLVNG PNLNLLGRRE PSVYGHQTLA DIVAELKQQA KLAEVELEHI QSNAEFELIN 
AIHATDAQMI IINPAAFTHT SVALRDALLG VAIPFFEVHL SNVHAREAFR HHSYFSDKAI 
GVICGFGSQG YEFALAAAIK RLNQPQ