Gene Shew185_3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3853 
Symbol 
ID5369386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4571842 
End bp4572273 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content48% 
IMG OID640832114 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_001368040 
Protein GI153002359 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAAGT TTGCCATGAT AAAAATCTCA AACCGTGTGG AACTTCAGGA AAAGGAAATC 
GAGTGGCAAT TTATCCGTTC GAGTGGCGCA GGCGGTCAGC ACTTAAATAA AGTGTCCACC
GCTGCGCAGC TAATTTTCGA TATTAAAAGC TCATCATTAC CCGAGTATTA CCAAGAACGC
TTGCTCAACA AGGCCGATCA CCGCATCACT AAAAGCGGCA AAATCATCAT TAAATGCCAA
GCGAGCCGCA GCCAAGATGC CAACCGCCAA ACGGCGTTGG AGCAATTTAT CGCCTTAGTC
GCCAGCGTCG GTGAAGTGCA GAAAAAACGC ATTCCTACCC GCGCCACCAA AGGCAGCCAA
ACGCGGCGAT TAGAGTCCAA GAAACAAAAA GGCGCCACTA AAGCCATGCG TCAGCAAAAG
ACTGATTATT AG
 
Protein sequence
MPKFAMIKIS NRVELQEKEI EWQFIRSSGA GGQHLNKVST AAQLIFDIKS SSLPEYYQER 
LLNKADHRIT KSGKIIIKCQ ASRSQDANRQ TALEQFIALV ASVGEVQKKR IPTRATKGSQ
TRRLESKKQK GATKAMRQQK TDY