Gene Shew185_3845 details

Gene Information

• Locus tag: Shew185_3845
• Symbol: mscL
• ID: 5373541
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 4563070
• End bp: 4563480
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640832106
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_001368032
• Protein GI: 153002351
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTTAA TTAAAGAGTT CAAGGCTTTT GCGTCCCGTG GCAATGTGAT CGACATGGCC 
GTTGGTATCA TCATAGGTGC CGCATTCGGC AAGATTGTCT CGTCCTTCGT GGCCGATATC 
ATAATGCCAC CGATTGGTAT CATTTTAGGC GGTGTGAATT TTAGTGATTT GAGCATAGTG 
CTGCAGGCAG CTCAAGGCGA TGCGCCTTCT GTCGTCATTG CCTATGGTAA ATTCATTCAA 
ACCATTATCG ACTTTACGAT TATCGCCTTC GCTATTTTTA TGGGCGTCAA AGCAATCAAT 
CGCTTAAAGC GCAAAGAAGA AGTCGCGCCT AAAGCACCCG CTGCACCGAC TAAAGATCAA 
GAACTGCTGT CTGAGATCCG CGATCTACTG AAAGCTCAGC AAGAAAAATA A 

 

Protein sequence

MSLIKEFKAF ASRGNVIDMA VGIIIGAAFG KIVSSFVADI IMPPIGIILG GVNFSDLSIV 
LQAAQGDAPS VVIAYGKFIQ TIIDFTIIAF AIFMGVKAIN RLKRKEEVAP KAPAAPTKDQ 
ELLSEIRDLL KAQQEK