| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3829 |
|---|
| Symbol | |
|---|
| ID | 5371373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 4548590 |
|---|
| End bp | 4549858 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640832090 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001368016 |
|---|
| Protein GI | 153002335 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTTGCCG CCAAGCCATT TGAACAACTG ATGCAATTGC CTGCTGCCGT GCGGCAATAT
TTGTTGATCA CCTTCAATTA TTGGAGTTTT ACCTTAACCG ATGGCGCACT GCGGATGTTA
GTGGTGCTGC ATTTTCACGA TCTTGGCTAC AGTCCGCTGG CGATCGCTAT GCTGTTTTTG
TTCTACGAGA TTTTTGGCGT AGTGACCAAT CTGATTGGCG GCTGGCTAGG GGCGCGTTTA
GGGTTAAATC GCACCATGAA CTTGGGCCTT GGGATGCAAG TGTTTGCCTT AGCCATGTTG
TTAGTGCCGG CGGCGAGTTT ACCTTTGTGG CTTGCTGGCG TTCCTTGGGT GATGGCGGCG
CAGGCTTTAT CTGGGATCGC TAAAGATCTC AATAAGATGA GTGCCAAAAG CGCGATAAAA
CTACTGGTGC CAAAAGGCGA GCAGGGCAAA CTTTACCAGT GGGTTGCGTT ATTAACAGGG
TCTAAAAATG CCCTCAAGGG CGCGGGATTT TTCCTCGGCG GCGCCTTGCT TGCCTTGCTC
GGGTTTGAGC TGGCGATCGC CGCTATGGCG CTCATGCTTG GACTCGTCTG GTTACTCAGT
TTAGTGATGC TGAAAAAGGA TTTAGGTAAA GCCAAGAATA AGCCTAAATT TACGGAGATT
TTCTCTAAGA GTCGCAGCGT AAACATTCTC TCGGCGGCGC GATTATTCCT GTTTGCTGCC
AGAGATGTGT GGTTTGTGGT GGCGCTACCC GTGTATTTGG CCAGCCAATT AGGCTGGGAT
CATTGGGCTG TGGGCGGCTT TTTAGCTGTG TGGGTTATCG GTTACGGCAT AGTGCAAACC
TTAGCACCTA AGATCACGGG TAATCGCCAA GCCCAAAGTC AGTTAACTGA TACAGCCCCC
GATGGTCGCA GCGCTTTAAT TTGGGCCAGT ATGTTGGCCT TTGTGCCCGC GCTGATTGCC
AGCGCGATAC AGTTCAGTTT TTATCCTGAA GCAAGTTTGC TACTGGGTCT CATGTTGTTT
GGCGCCCTGT TTGCGGTGAA CTCATCGCTG CACAGTTACT TGATTGTGAG TTACGCCAGT
GAAGATGCGG TGTCGCTGGA TGTGGGTTTC TACTATATGG CCAATGCTAT GGGGCGTTTA
GTCGGCACTG TGCTGTCTGG CTTAGTGTAT CAAGCCTATG GTTTAGCTGC CTGTTTGTGG
ATTTCGACCG CTTTTATCGG CATCACTGCT ATGATTTCGA TTAAGTTACC TCGGCAAGCT
GTGGAATAA
|
|---|
| Protein sequence | MFAAKPFEQL MQLPAAVRQY LLITFNYWSF TLTDGALRML VVLHFHDLGY SPLAIAMLFL
FYEIFGVVTN LIGGWLGARL GLNRTMNLGL GMQVFALAML LVPAASLPLW LAGVPWVMAA
QALSGIAKDL NKMSAKSAIK LLVPKGEQGK LYQWVALLTG SKNALKGAGF FLGGALLALL
GFELAIAAMA LMLGLVWLLS LVMLKKDLGK AKNKPKFTEI FSKSRSVNIL SAARLFLFAA
RDVWFVVALP VYLASQLGWD HWAVGGFLAV WVIGYGIVQT LAPKITGNRQ AQSQLTDTAP
DGRSALIWAS MLAFVPALIA SAIQFSFYPE ASLLLGLMLF GALFAVNSSL HSYLIVSYAS
EDAVSLDVGF YYMANAMGRL VGTVLSGLVY QAYGLAACLW ISTAFIGITA MISIKLPRQA
VE
|
|---|
| |