Gene Shew185_3825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3825 
Symbol 
ID5372729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4543038 
End bp4544393 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content49% 
IMG OID640832086 
Producthypothetical protein 
Protein accessionYP_001368012 
Protein GI153002331 
COG category[S] Function unknown 
COG ID[COG3930] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02421] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAGT CGTTAGCCCA ATATCAACAA GATCTACGCC GTTTTTCCGA TGAATTAATT 
CGCATCCAAA CGCCAATAAA AATCTTAGAT GCTATCAAAT GGCCGCGGGA AATGGAGGAG
CGCTTTCTCT CGAATAAGGG CACTGTACTT CCGGCTATCA AGCAAGAGTT CTATCAAAAC
ATTGCCTTAC CTTTTGACCC CGTCAAAACC CACGCAGAAC TCGCCTCCCT AAAACAGGAT
ATCCATAGAC GTTTAGGTAA ACGGGATAAA CTCGGCAAGA TATTGGTGGC TAACGTCGAT
CAATATCGCC TTGTGGTCGA TATGCTCAAA AACAGAGGCA CGCCGACCTT TGGTAAACTT
AGCCAAGAAT TATACGGCAG CGCGAGTCAC AGATTGCACG GCGATCGTCA TACGCTGCGA
CAGTTAGGCG ATAAACTCAG TTATATCTTC TCGCTGCCAG CAGCGAGACA CATGAATAAA
CATCATCCTA AGATTATTAG CGCACCAGAA GCGGTTCACG TGCTCAGTCA ACGTTTAGAG
AAATACTTCC ATAGCGATGA CATGCGCGTG CGCCTCAGTG ACGGTATCGT CTCCGATGCC
GCTGTGGGTG GTGATACCGT TAAGCTCAAT AGCAAAGCCA TGTTCAGCGA GTCGGATCTC
AATGTATACG AGGTTCACGA AGGTTGGGTG CATGTCGGCA CTACGCTCAA TGGTCGAGCC
CAACCCCACG CCACTTGGCT CAGTGTCGGT TCGCCGCGGG TAGCCGCGAC TCAAGAGGGT
TTAGCTGTTT TACTGGAAAT GCTGACCCTA AGTTCAAATC CGGGACGAGC TCGGCGTATT
AGCGACCGTG TCGCCGCGGT CGACATGGCG GAAAATGGCG CCGACTTTAT TGAAGTATTC
AATTATTTCA GAGGATTAAA CCTGAGCGCG ACCGACAGTT ATCGCGTCAC CCAAAGGGTT
TTCCGTGGGG GTATGGTAGA AGGCGGCAGC TTCTTCACTA AGGATATTTC CTATGTGCGC
GGCTATGTGG AAAACATTAA CTTTATCCGC AGTGCTATCA CCTCAGGCCT TCCCGAACTT
ATCCCTATGT TGTTCCTCGG TAAATTGGCG ATCGAAGATA TCCCTGTGTT ATACCAGGCC
TGCCAAGAGG GCATACTGAC GACACCGAAA TATTTACCGC CCATGTTCGA TAACTTTAGT
GGTCTTTATG CTTGGTTTGG GTTCGCCTCA GGCTTAGCTG GAATCGATTT GAAAGGCGTA
CAACGTCACT TCACTCGCCT GTTTAAAGAC TTACCAAACG TCGAACCAAC CTTTGAGTTA
CTCGACGATA CTGAGTTCGA TAACAACTCG GATTAA
 
Protein sequence
MSESLAQYQQ DLRRFSDELI RIQTPIKILD AIKWPREMEE RFLSNKGTVL PAIKQEFYQN 
IALPFDPVKT HAELASLKQD IHRRLGKRDK LGKILVANVD QYRLVVDMLK NRGTPTFGKL
SQELYGSASH RLHGDRHTLR QLGDKLSYIF SLPAARHMNK HHPKIISAPE AVHVLSQRLE
KYFHSDDMRV RLSDGIVSDA AVGGDTVKLN SKAMFSESDL NVYEVHEGWV HVGTTLNGRA
QPHATWLSVG SPRVAATQEG LAVLLEMLTL SSNPGRARRI SDRVAAVDMA ENGADFIEVF
NYFRGLNLSA TDSYRVTQRV FRGGMVEGGS FFTKDISYVR GYVENINFIR SAITSGLPEL
IPMLFLGKLA IEDIPVLYQA CQEGILTTPK YLPPMFDNFS GLYAWFGFAS GLAGIDLKGV
QRHFTRLFKD LPNVEPTFEL LDDTEFDNNS D