| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3822 |
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| Symbol | |
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| ID | 5371799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4538960 |
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| End bp | 4541113 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640832083 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001368009 |
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| Protein GI | 153002328 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.834811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAGG ATGAGTTTTC TAAATCGCAT AGCCCATCAA ATAATATCTA CTTTAGCGTG
CTGAGCTCTA GCTGGCTGAT GATTGTCGCT GCTTTACTTT TTATGGGCAT CTCTTGGTAT
GTGCTGGAGC AATATCTTAG AGATCGTGGT GAAGAGCGTT TCGAGAACAG TGTTCAAGAG
TTAACCGAAG CGGTGAATCG CAGAATGCTT GCCTACGAGC AGGTCTTACG CGGTGGTGTC
GGCTTGTTAT TGTCCTCCAA TAGTGTAACC CGCAAGGAAT GGCAAACCTA TGTTGTCAAT
GCACATTTAT CTGAGTATTA CCCGGGTTTC CAAGGCTTTG GCTATGCTCA GTTACTTAAA
CCTGACACAT TAGATGCTCA CGTTCAACAA GTTCAAGCCG AAGGCTTTAA AGACTATAAA
GTGTACCCAG AAGGAGTACG TGATAAGTAT TGCGTGATCT TGTATTTAGA GCCTTTTGAT
TGGCGCAATC AAAGAGCCTT TGGCTATGAC ATGTGCTCCG AGGCTAATCG TCGCAAAGCC
ATAGAACACG CCATTACCAC TGGTCAGCCA ACTATCTCTG GCAAGGTCGC TTTAGTTCAA
GATACGCCCG AAGATGCTAA AGCGGGTTTT TTGATGTATT TGCCAATTTA TCAAGGGATT
GTGGCAACTG AGGCTGAACG GAAACATCAG GCGATTGGAC TCGTGTATGC GGCGTTTAGG
ATGGACGACC TCATGCAAGG AATTATGGGG GATCGATTCT CAGGTTTGAA GCTCGCCATT
TATGAAAACC CACAGGCAAA TGCCGACAGT TTAATGTTTA CTAGTAGTAA AGTACTTCCA
AATCAAAAAG ATGTGTTTTA TCAGTCACAG ACCGACTTGA TTGGCGGTAG GCAGTGGCGC
TTGGACATTT CATCACAATC GCGTTTTATC TCAAGATCGG AAGAGACCCA AGGTATCTGG
CTGCAATTTA TCGGTTGTGC ATTCATTTTG GCATTGTTTT ACTCGGTGCT AATCATGGCG
CGTAATCGAT ATAAAGAGTC ATTACTTACC TCTGAGCTAA TCGCGAATGA AAAACGCTTT
AGACTCGTCA TTGAAGCCTC TCCAAGCGCA CTATTTATGG TCGATAAGGC AGGGATTATT
ACGTTAGTGA ACACCCATGC GGAACGTTTA TTTGGTTATG CCAGAGACGA GTTACTCGGC
CGCTCTATCA ATATGTTATT GCCAGACGCG CTGAGAGATG TACACCAGCA GCACATGAAT
AATTACTTAG TGCAGCCGAT TGCGAAAAAT ATGTCGATGC GGGATGACTT ATTTGGCTGT
TGTAAGGATG GCAGTCGACT CGCGATAGAA GTGGGGCTGA CGCCTATTCA TTTCAGTAAT
GGCATTTTCA TTCTCGCGAC GATTAACAAT GTGTCTGAAC GTAAGCGCAT TGAAGTCCAG
CGTGCAGAAC ACATGCAAGA GCTTGAGCGG ATTAATCAAG AACTCGACCG CTTTGCCTAT
ATCGCCTCCC ATGATTTGAA ATCCCCACTA CGGGGTATCG AGCAGTTAAC TTCTTGGTTA
GCAGAGGATT TATCCGATAA CACCAATGAA AACGTGCAGA AATATCTCGG GCTGATCCAA
AGTCGTATTC ATCGCATGGT GTTATTGCTC GATGGGCTAT TGATGTTTTC CCGTATTGGC
CGTGTCGATA CTGAAACCAC AGAGGTCAAC AGTCGGCAAC TGGCTGAAGA CATGTTTGCG
CTCGTCGCGC CGCCACAGGG GTTTGAATTA GTTCTAAAAG GGGAGTTTCC AAATTTCCAT
ACTGTACGCG CACTGTTGGA ATTGGTGATA CGAAATTTAA TCAGCAATGC CATTAAGCAC
CATGACTTAG GCACAGGTGT GATCACTATC TTATGTGAGG CCGCGGATAA ACATTATCTA
TTCAGTGTGA TAGACGATGG CCCTGGTATC TCAAGTGCCT ATCAGAATAA AGTCTTCGAA
ATGTTTCAAA CACTTAAACC TAGGGATGAA GTAGAGGGCA GTGGTTTAGG GTTATCACTT
GTGAAGAAAA CAGTTGAAAG TTTAGGTGGG AATATTCAAC TCAAATCGCA GGGCAGAGGC
TGTTGTTTTT ACTTTACTTG GCCTAAGAAA ATAGTGAAAA AGGAGCTTCT ATGA
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| Protein sequence | MDKDEFSKSH SPSNNIYFSV LSSSWLMIVA ALLFMGISWY VLEQYLRDRG EERFENSVQE
LTEAVNRRML AYEQVLRGGV GLLLSSNSVT RKEWQTYVVN AHLSEYYPGF QGFGYAQLLK
PDTLDAHVQQ VQAEGFKDYK VYPEGVRDKY CVILYLEPFD WRNQRAFGYD MCSEANRRKA
IEHAITTGQP TISGKVALVQ DTPEDAKAGF LMYLPIYQGI VATEAERKHQ AIGLVYAAFR
MDDLMQGIMG DRFSGLKLAI YENPQANADS LMFTSSKVLP NQKDVFYQSQ TDLIGGRQWR
LDISSQSRFI SRSEETQGIW LQFIGCAFIL ALFYSVLIMA RNRYKESLLT SELIANEKRF
RLVIEASPSA LFMVDKAGII TLVNTHAERL FGYARDELLG RSINMLLPDA LRDVHQQHMN
NYLVQPIAKN MSMRDDLFGC CKDGSRLAIE VGLTPIHFSN GIFILATINN VSERKRIEVQ
RAEHMQELER INQELDRFAY IASHDLKSPL RGIEQLTSWL AEDLSDNTNE NVQKYLGLIQ
SRIHRMVLLL DGLLMFSRIG RVDTETTEVN SRQLAEDMFA LVAPPQGFEL VLKGEFPNFH
TVRALLELVI RNLISNAIKH HDLGTGVITI LCEAADKHYL FSVIDDGPGI SSAYQNKVFE
MFQTLKPRDE VEGSGLGLSL VKKTVESLGG NIQLKSQGRG CCFYFTWPKK IVKKELL
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