| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3803 |
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| Symbol | |
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| ID | 5372129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4520701 |
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| End bp | 4522350 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640832064 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001367990 |
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| Protein GI | 153002309 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.717222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCGCT ACCTCGCTCT AGTGTTTGCC CTGTTTATCC CATTATTAAG TCTCTCATCC
CCAGCGCAAG CCGAACCTGT CGCGGCAACC GAAAGTACAT CAACCACACC TGTGGCGGTC
AAAGCCGAAC TGGCTATGTT GCAACAAGCT ATCGATACCG ATATCCATAA GCTGAAACAT
GCCAAAGGTG AGTTGAAAAC GATTGTCGAA TATCGCATTC AAAACAAAAC CTTACAATTA
CGTAATAAGA TTAAAGATTT GCTCGAAGCA ACGCCGATCG ACAGTGCTTT TCTGCAGCCA
TTAATCCAAG GGCAATTGAA CTACATCCAA CAGATTGATA CCTATATCGA TGACAACATT
GATAAATTGG AGCTGCAACT AGGCTCGGGT ACAGATGATT CGATTCTGCT CGATATCTCT
AAGCGCGAAT TAGACAAAGA CACCTATTAC AAACAGCAAC TCGAGACACT CAATTGGCTC
GAACAAGTTG GCCAAGATGT TAGCGAAGCA CAAAAGTCCC TGCTGCAAAT TTTGATTGCG
CGTGCAGATA TGCTTGAAAG CTTAGTGACT TACACTCAGC AGCAACTGCA AGCTGCGGTC
GATACCGCAA CCAATGCCGG TAAAGATGTC ACGTCGGCGC AAACTAGCCA CGTGATGATG
CTAAAGGAGC GCTTGGCCCA AAATAGCCAA AGCTTAAATA TCGACATCAA CTTACTCGAT
GCTTTAGGCC AAGACACCGC TGCGTTGAAA AAGACCTTGT TTAGTGTGTC AGGCGATATT
ACTCAGGACG TATTGAGCTT TGATGTGGCC TCGAGCTTAG TCGAGCAGTG GCTGAACACG
GCGCAGGAAC AAGCTATAAA TCATGGCCCT ACCGTCGTGT TTAAGTTGTT TGTATTCTGC
TTGATCTTAA TTATCGCGGG TCTCGCCGGC AAGTTAGCCA AACAGATAGT GAAGAATACC
GTTAGCAATT CCAAGTTGAA TTTGAGCAAG TTATTACAAG ACTTCTTCAC ATCGCTATCA
GGCAAAGCCG TCTTTACCAT AGGACTCTTG GTCGCCCTGT CCCAGCTTGG GATCGAACTT
GGGCCGCTAC TCGCAGGCTT TGGTATCGCG GGTGTGATTA TTGGTTTTGC CCTGCAAGAT
ACCCTGTCGA ATTTTGCCTC TGGCATGATG ATCTTAATTT ATCGTCCCTA CGATGTGGGT
GATTTGATCA ACGCCGCTGG CGTCACGGGT CGAGTGAGCC ACATGAGTCT GGTCTCGACT
ACGATTAAAA CCATGGATAA CCAACGTCTT ATTATTCCTA ACAATAAGAT TTGGGGCGAC
ACTATTAACA ACATCACGGC CGAGCACCAA CGTCGAGTGG ATATGACATT TGGTATTGGT
TACAGCGACA ATATCGAACA TGCTGAAGCG ATTCTCAAAT CCATCGTCGA GGCGCATCCA
AAGGTGCAAG CACTGCCAGC GCCAACGATT AAACTGCATC TGCTGGGTGA GTCTTCGGTC
GACTTTATCG TGCGCCCTTG GGCGAAACCG GAAGATTATT GGGAAGTGTA TTGGGATATT
ACCCGTGAAG TGAAAATGCG TTTCGACGCC GAAGGGATCA GTATTCCGTT CCCGCAGCGC
GATGTGCATA TCTATCAAAC CACGAAGTAA
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| Protein sequence | MHRYLALVFA LFIPLLSLSS PAQAEPVAAT ESTSTTPVAV KAELAMLQQA IDTDIHKLKH
AKGELKTIVE YRIQNKTLQL RNKIKDLLEA TPIDSAFLQP LIQGQLNYIQ QIDTYIDDNI
DKLELQLGSG TDDSILLDIS KRELDKDTYY KQQLETLNWL EQVGQDVSEA QKSLLQILIA
RADMLESLVT YTQQQLQAAV DTATNAGKDV TSAQTSHVMM LKERLAQNSQ SLNIDINLLD
ALGQDTAALK KTLFSVSGDI TQDVLSFDVA SSLVEQWLNT AQEQAINHGP TVVFKLFVFC
LILIIAGLAG KLAKQIVKNT VSNSKLNLSK LLQDFFTSLS GKAVFTIGLL VALSQLGIEL
GPLLAGFGIA GVIIGFALQD TLSNFASGMM ILIYRPYDVG DLINAAGVTG RVSHMSLVST
TIKTMDNQRL IIPNNKIWGD TINNITAEHQ RRVDMTFGIG YSDNIEHAEA ILKSIVEAHP
KVQALPAPTI KLHLLGESSV DFIVRPWAKP EDYWEVYWDI TREVKMRFDA EGISIPFPQR
DVHIYQTTK
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