| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3794 |
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| Symbol | |
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| ID | 5370270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4513912 |
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| End bp | 4514898 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640832055 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001367981 |
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| Protein GI | 153002300 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.807786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAACG ACCAAAGCGC AATGAACGAA CTACACTGGC TCATCGATAT GGTGCAAACC
ATAGAGGTGG GATTAGTGGT ATTAGATCGC CATTACAATA TCCAGCTGTG GAACGGTTTT
ATGGAGAATC ACAGCGGTGT TTCCCCTAAT TCGATCAAAG GTCAAAACCT GTTTACCCGC
TTCCCCGATC TGCCCGCCAC TTGGTTAAAG CAGAAAATGG AATCGGTTTT CATGCTTAAA
AACCGTGCCT TTATCAGCTG GGAACAAAGG CCATACGTTT TCCAATTTAA AAACTACCGC
CCGATCACAG GCCGTGCAGA CTACATGTAC CAAAACGTGA CCTTGTTGCC ACTGGCATCG
CTTACAGGGC AAGTGACCCA TATCAGCGTG ATTATTTATG ATGTGACTGA TATTGCCATC
AACAAGTTAC AACTTAAAGC CGCGAACGAG CAACTCGAGC GCCTAAGCCA AACCGATGGT
TTGACTCAGT TGCATAACCG TCGTCATTGG CAAGAATGTT TAGACCATGA GTACGACATG
TATGCCCGCT ACTCAGGCAT GGCAAGTTTA GTGATGATAG ATATCGATAA CTTTAAACAT
ATCAACGACA GCTATGGTCA TCTGGCGGGT GATAAAGTGA TCCAGCATAT CGCCCACTTA
CTCAGCCAAT CCCTGCGTGA GACCGATTGT GCCGGACGTT ATGGCGGTGA AGAATTTGCG
GTTGTATTGC CCAAAACCAG CGGCGCAGAT GCGATGAATT TTACCGAGCG GCTCAGGGAA
AAAATCGCCG CATCCGTCAT AGTGTATGAA AGCTTGAAGA TCTCTGTGAC TGTGAGTTTA
GGTGTATGCG AAATTGGTTC CCACATCACC AGCAGCTCAA GCTGGATTTC TTGCTCCGAT
AAAGCGCTGT ACGAAGCCAA GCAAAAAGGC CGTAATTGCA GCGTTCTGCA TACCAGTACA
TCTGCGAAAA AAATCAGCCA AACTTAA
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| Protein sequence | MSNDQSAMNE LHWLIDMVQT IEVGLVVLDR HYNIQLWNGF MENHSGVSPN SIKGQNLFTR
FPDLPATWLK QKMESVFMLK NRAFISWEQR PYVFQFKNYR PITGRADYMY QNVTLLPLAS
LTGQVTHISV IIYDVTDIAI NKLQLKAANE QLERLSQTDG LTQLHNRRHW QECLDHEYDM
YARYSGMASL VMIDIDNFKH INDSYGHLAG DKVIQHIAHL LSQSLRETDC AGRYGGEEFA
VVLPKTSGAD AMNFTERLRE KIAASVIVYE SLKISVTVSL GVCEIGSHIT SSSSWISCSD
KALYEAKQKG RNCSVLHTST SAKKISQT
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