| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3790 |
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| Symbol | |
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| ID | 5372995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4507447 |
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| End bp | 4510353 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640832051 |
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| Product | ATP-dependent helicase HepA |
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| Protein accession | YP_001367977 |
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| Protein GI | 153002296 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTTCG CCTTAGGTCA ACGTTGGATA AGTGATACCG AGTCAGAGCT TGGTTTAGGA
ACTGTGGTTC AAGTAGAAGG CCGTATGGTC ACTGTTTTAT TCCCTGCCAC GGGTGAGAAC
CGCATGTTCT CCCGAGCAGA AGCCCCTCTG ACACGCGTTA TATACAATCC CGGCGATTCG
GTTGAAAGCC ATGAAGGCTG GAGCCTTGCG GTCAGTGAAT TGACCGAGAA AGACGGGATA
GTGATCTATC ACGGCATTCA CAGTGAGACA GGCGAGCAAG TTACCCTGCG TGAAACCCTG
CTGAACCACA ATATTCGTTT CAATAAACCC CAAGACCGTT TATTCGCCGG CCAAATCGAT
CGCCTCGACC GTTTTGGTGT GCGTTATCAG TGCCAAATGT TGCGCCACAA ACTGGCCTCA
TCGGATTTGC TTGGTCTGCA AGGTCCACGC GTTGGACTTA TTCCGCATCA AATGTGGATT
GCCCATGAAG TCGGTCGTCG CTATGCGCCG CGTGTACTGT TAGCGGATGA AGTGGGTTTA
GGTAAAACCA TTGAAGCGGG TCTGATTATT CACCAACAAC TGCTGACCGG CCGCGCCGAA
CGCATTCTGA TTATCGTGCC CGATACTCTG CGCCATCAGT GGTTAGTGGA AATGCTGCGC
CGCTTTAATC TGCGCTTTTC GGTATTCGAT GAAGACCGTT GTGTAGAAGC CTATGCCGAT
CACGACAATC CTTTCTACAC AGAACAGTTA GTGATTTGTT CACTCGAATT ACTGCGTAAG
AAAAAACGTC TTGATCAAGC CCTAGATGCC GATTGGGATC TGTTAGTGGT TGACGAAGCG
CACCACTTAG AATGGACCGA AGAAGCGCCA AGCCGCGCCT ATCAAGTGGT TGAAGCATTA
AGCGAAGTGA TCCCAGGCGT GTTACTGTTA ACCGCAACGC CGGATCAACT TGGCCATGAG
AGTCACTTCG CCCGTTTACG CCTGCTCGAT CCGGATCGTT TCTACGATTA CGATGCTTTC
TTAGCTGAAG AAGACAGTTA TAAAGACGTC GCCATTGCCG CCGAAGCCTT GGCTGGTAAC
GCTAAATTAC CCGATGCAGC CATCAACAGC TTGACCGAAT TACTGGGCGA GAAAGATATC
AGCCCAAGTA TTCGTTTAAT CCAAGCCGAG GGTATTGATG CCGAAGTACA ACAGGCCGCC
CGCAGCGAAT TACTGCAAGA ATTACTTGAC CGTCACGGTA CTGGCCGCGT GTTATACCGA
AACAGCCGCG CCTCAGTAAA AGGCTTTCCA AAGCGTTTCT TTAACGCTTA CCCACACGCC
ATGCCAGATC AATATCAAAC AGCCGCACGC GTCAGCGGCA TGATGGGCGG ACACAAGTCA
TTAGAGGCGA AAGCGGCGCA AGCCCTAAGC CCTGAAAAAC TGTATCAAGA ATTTGAAGAT
AACAGCGCCA GTTGGTGGAA GTTCGATCCC CGTGTGGATT GGTTAATCGA GTTTTTAAAA
TCCCACCGCA GCAAAAAAGT GCTGATCATC GCCAGCCAAG CGGAAACGGC CCTGAGCTTA
GAAGAAGCCC TGCGCACCCG CGAAGGGATT CAAGCAACGG TATTCCACGA AGGCATGTCG
ATTATCGAGC GCGATAAAGC CGGCGCTTAC TTTGCCCAAG AGGAAGGCGG CGCACAGGCG
CTGATCTGCT CTGAAATTGG TTCTGAAGGC CGTAACTTCC AGTTTGCCAG TCACTTAGTA
CTATTCGATC TGCCGCTAAA CCCAGACCTA TTGGAACAGC GCATCGGTCG TTTAGACCGT
ATCGGCCAGA AAAATGATAT CCAAATTCAC TTGCCGTACC TTGAAGACAC CGCCCAAGAA
CGTTTGATGA AGTGGTATCA CCAAGGGCTA AATGCCTTCG AACTGACTTG TCCGAGTGGC
CATGTGCTTT ACAGTGAATT TGCCGAAGAT CTGTTAAACG TGCTTGTGGT TGATGACAGC
GACGAGCTGA CAAACCTGCT CAATCACACC CAGAGCCGTT ATAAAGAACT CAAGCACACC
ATGGAGCAAG GCCGCGACAA GCTGCTGGAA ATCAACTCAC ACGGCGGCGA GAAGGCAATG
GCTATCGTCC AGCGCCTCGC CCAGAATGAT GGTGATACCC ATTTGATCGG TTCAGTGATC
CGTCTGTGGG ATATTATCGG TGTCGATCAA GAAGATAAGG GTGAAAACTC GATCATTCTG
CGTCCAAGCG AACACATGAT GTTCCCAACC TACCCTGGCT TGCCAGAAGA TGGCGTGACT
GTGACCTTCG ACCGTGACAC AGCGTTATCT CGCGATGATA TTGCGCTGAT CACCCAAGAG
CATCCACTGG TGCAAACGGG GCTAGATCTG ATCACAGGTT CAGAAACTGG CACCACCAGC
GTCGCAATTC TGAAGAATAA AGCCCTGCCA GCAGGTACCT TATTCTTAGA ACTCATCTAC
ATGGCCGATG CTTCTGCACC TAAGTCGAGC CAGTTGTATC GTTATTTACC ACCTACACCC
ATTCGCGTGT TGCTGGATAA AAACGGTAAC GACCTGTCGG CTAAAGTGGA TTACGCCAGT
TTCGATAAGC AATTGAGCGC GGTGAATCGT CACATTGGTG GCAAGTTAGT CACCGCATCT
CAGCCAATTC TGCATCCGTT ATTTGCTAAG GGTGAGGAAT ATGCTCAAGT GGTTGTCGAT
GAAATGGTCG CCCAAGCCAG AGAGAAAATG ACTCAGCAAC TGAGCGCTGA GCTGAGTCGT
TTAGAGTCAC TTAAGGCGGT AAACCCCAAT ATCCGTGAGG AAGAATTGGA ATACCTGCGC
AATCAGATGC AAGAGTTAAA CACTTATCTG GATGCCAGCC AGTTACAACT CGATGCGATC
CGTATGGTGC TCGTCAGCCA CGTATAG
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| Protein sequence | MPFALGQRWI SDTESELGLG TVVQVEGRMV TVLFPATGEN RMFSRAEAPL TRVIYNPGDS
VESHEGWSLA VSELTEKDGI VIYHGIHSET GEQVTLRETL LNHNIRFNKP QDRLFAGQID
RLDRFGVRYQ CQMLRHKLAS SDLLGLQGPR VGLIPHQMWI AHEVGRRYAP RVLLADEVGL
GKTIEAGLII HQQLLTGRAE RILIIVPDTL RHQWLVEMLR RFNLRFSVFD EDRCVEAYAD
HDNPFYTEQL VICSLELLRK KKRLDQALDA DWDLLVVDEA HHLEWTEEAP SRAYQVVEAL
SEVIPGVLLL TATPDQLGHE SHFARLRLLD PDRFYDYDAF LAEEDSYKDV AIAAEALAGN
AKLPDAAINS LTELLGEKDI SPSIRLIQAE GIDAEVQQAA RSELLQELLD RHGTGRVLYR
NSRASVKGFP KRFFNAYPHA MPDQYQTAAR VSGMMGGHKS LEAKAAQALS PEKLYQEFED
NSASWWKFDP RVDWLIEFLK SHRSKKVLII ASQAETALSL EEALRTREGI QATVFHEGMS
IIERDKAGAY FAQEEGGAQA LICSEIGSEG RNFQFASHLV LFDLPLNPDL LEQRIGRLDR
IGQKNDIQIH LPYLEDTAQE RLMKWYHQGL NAFELTCPSG HVLYSEFAED LLNVLVVDDS
DELTNLLNHT QSRYKELKHT MEQGRDKLLE INSHGGEKAM AIVQRLAQND GDTHLIGSVI
RLWDIIGVDQ EDKGENSIIL RPSEHMMFPT YPGLPEDGVT VTFDRDTALS RDDIALITQE
HPLVQTGLDL ITGSETGTTS VAILKNKALP AGTLFLELIY MADASAPKSS QLYRYLPPTP
IRVLLDKNGN DLSAKVDYAS FDKQLSAVNR HIGGKLVTAS QPILHPLFAK GEEYAQVVVD
EMVAQAREKM TQQLSAELSR LESLKAVNPN IREEELEYLR NQMQELNTYL DASQLQLDAI
RMVLVSHV
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