| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3788 |
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| Symbol | |
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| ID | 5370047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4501715 |
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| End bp | 4505431 |
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| Gene Length | 3717 bp |
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| Protein Length | 1238 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640832049 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001367975 |
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| Protein GI | 153002294 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCGA GTGAGCCGGA TCTGCAACTA AAATCGCCGA TCCAGAAGAA CTACAACCGT
GCCGTTTTTT ATACGTACAT TGGCGTTATC GTCATGTCTT TGTTGACCGC ATGGATGTTT
TTCGACCGCC AAAAAGCGCA GCAGATGGAA CAGCGTGAAG AACAGGTTCA GCGCCATGTT
CTGCAAATCG ATTTGCTACT CGAGTCGAGC ATTAGAGCGG TAAAAAGCTT ACGCAACGTC
GCCGTGGATC ATTTGCGCTT AGGCGAACTC GTGCGTAAAG AACGTTTACC CCAATACGGT
AAATTCAACG AAAGCGGCCA GTATTTTACC TTAGAACCTA GCTACGCCCA GAGCGGTGAG
CCTTTTACTA ACATGGGTAG GATCACTGGT GCAGGTTCCC TCGATGGCCG CAGCGACAAG
TTCTATCAAG AGCTTGAGAT GTTGTTTGAG CTGTCACTGT CATTCCCCGT CGCTAAAGAA
GCCGCGCCGA AAGCCTCGGC AATTTATTAC CTGTCAAAAC GTAGGATCAT GTCCTACTTC
CCTTGGTCGA ATGACGATCA ACGTTTTAGG GACGAATTAC TCAACAAGAA ACAGTTCCAA
TATGCCACCC CGGCAATGAA TCCGCAGCGC AGTGTGTTTT GGAGCGAAGC CTATGTCGAC
TCCACGGGCA AAGGCTTATT GACCACTTTA GGTGTGCCCG TTTATTTGGA CGATGAGTTC
ATTGGCTCAA TTAACTTAGA CATGACGCTT GCCTCGTTAG CACGGCAAAT TCGGGTCTAC
TTTAAGATGC CGGGCACAGT GATTTTGCTC GACCAACAGA ACAATATTTT ATCCCACAGC
GATTTTGATA GCTCAGACAT CAATCGGGTT TATCACATCA GCCAACGTAT TCCCTCTGAG
CTGCATTCTT TGCCTGAGTC GGAATTGTTC GATGCCCACG ACGGCATCAT CCGCAACGGC
TATTACATTC ACTCGGTTGC CCTGCATAAC GCGCCTTGGC GTTTACTGTA TTTGCAGGAT
GAGGACGACC TATTCCAAGA CTCGTGGGAA AAACTGCAGC TGACCTTTAT TTTAGTGGTT
ATCGCCCTGT CTGTGTTGGT GACCATAGTG CATTGGCAGA CGCGTCGATC TTTTGTGAGT
CCAGCCTCGC GACTACTGTC GCATCTTGAG GGTTGCTCGC AAGAGCCGCG TAAGCCACCG
GAGAAAATCA CCCGCGGCTG GGAACCTTGG TTCTTGCTGG TGAGTCGGAT TTTTGAGGAA
AACAAACAAT ATACCCACCA TTTAGCGGAG CAGAATAAGC GGCTCGATAA GCTAGTTGCG
CGGCGTACTG AACGCTTAAA AGACACCACA GAGCGGCGTG AGCGCGAATA TGCGCTGCTA
AGATCTTTGC TTGACTCGAT CCCCGAAGCC ATTGTCTTTA AAGATAAAGA AGGCAACTAC
TTAGGTTGTA ACAAGGCGGC TGAGCGCATG CTGGGTTACA CAGAGAGCGA GATGATAGGT
TTGTCATCTG AGGATCTGAC CTCGCCAGAA ATGGGCATTC GTATCCGTGC CGAAGACGAA
CAAGTCTTAA AAGATCGCAC GCCGCTGCGC TACCAAGAAA AGGTTGAGCT TGCGGGTAAA
CCTGTGCTGC TCGATACCCT TAAACTGCCT TTTTATAATC GCCGCGGTGA ACTGCAGGGC
TTGATTGCTG TGTGGCGTGA TGTGACGCGG GAATACGAGT CCGCTGAACA GTTACGCCTG
TCCGAAGAGC GTTATCACTT AGCCATGGAT GCGGTGGAAG ATGGTCTGTG GGATTGGTAT
TTAGACTCTG AACAGATCAT TTGTAACCCT GCCTATTATT CTATGCTGGG TTATAAAACC
AATGAGTTCC CAGCTCTTGT GTCGACGATT GATGAATTAT CCCACCCCGA CGATCGGATT
CGCGTCGAGG AATACCGTGC TCAATATTTA GCGGATCCTG TCGGCGCTTA CGAAATCGAA
TTCCGTATGT TAGGTAAAAA TGGCGGCTAT CACTGGGTGT TATCCCGTGG CCGTGTGGTG
GAGTTCACCG CAGAAGGTCA GCCTAAGCGT ATGCTCGGTA CCCATAAGGA TATTACCCGC
CATAAGAGTA ACGAAGTGGC GCTTTTGGAA GCCAAGCAAG ACGCCGAATT AGCTAACCTC
TACAAGAGTG AATTCTTGGC TAACATGAGC CATGAGATCC GCACGCCGAT GAACGCCATT
ATCGGTATGT TGCAGTTGGC ACAGCGCACC TCGTTAACGG CGCAGCAGAA AGATTACCTC
GAAAAAGCCG GTTTCTCGGC GCAATCGCTG CTGAGGATCA TCAACGATAT TCTCGACTTC
TCTAAAATTG AGGCGGGTAA GTTGGAGCTT GAGCGGGTGC CATTCCCGCT GGATAAAGTG
CTCGATCATG CCCTCGATCT CAATGCGCTC AAGGCACAGG AGCAGGGCGT TGAGTTACTC
TTGTATGCCC CAGTGACGGC GGGACTCATT CTTAAGGGCG ATCCACTGCG TTTGGGCCAA
GTGCTGATTA ACTTGCTATC GAATGCGGTG AAATTTACCC AGTCTGGCGA AATTGAGCTG
GGTTGTGAAG ATGTCGGCGA GCGAGATCAT CGGATTACCT TGAAGTTCTG GGTGCGCGAT
ACGGGGATCG GCATAGGTAA AGATCAACAG GATAAGTTGT TTGATGCCTT CGCCCAAGCC
GACGGTTCGA CCACCCGTAA ATACGGCGGC ACTGGCTTAG GTTTATCGAT CAGTAAGCAT
CTGGTGTCTA TGATGGGCGG TAAGATGCAA GTGCAGAGTG AGCTTGGGGT CGGCAGTACC
TTTAGCTTTA CCATCAGCTT TGAAATTGCC GAAGCCGCTA AGATTGAGCC TTTCGTCGTG
CCAGAAAAAC TCAATAGCCT ACGCACCTTA GTCGTTGACG ATAACCCGAC TGCACTGCAA
ATCTATTCGA CCTTGATGCG AGATTTCCAC TTCGAAGTCG ATACCGCCGC TAGCGGCGCC
GAAGCACTTT ATAAACTGTC GCGGGCGCCA ATCGATCTGT TATTGCTCGA CTGGATGATG
CCCGAAATGG ACGGCAGCGA TGTGGTCAGC GCCATAGATA CTATGGTCGC CGAAGGCCGC
TTAGCGAAAC GGCCGGTGAT TATCATGATG ACGGCCTATG CGGCAGAGCC CTTGCAGCAT
GAAGTTGATA GTGCCAATGT GTTTGCCGTA CTGCAAAAAC CGTTTAAGGC ATCGAGCCTG
TTCGATGAGA TCATTGCCGC CTTTGCCGAT GAGCCGAGAT TGAATGTGGT TCAGCCTATG
GTTGAAGTCC AAGTTGAAGA CGGAGAACAC ACAGGTTTAG TGCTGCTGGT GGAAGATAAT
TTTATCAATC AGCAAGTGGC GACTGAACTC CTTAAAAGTG CAGGCTATGA AGTGGTGCTG
GCCGGCAATG GCCAAGTTGC GCTGGATACC ATCGACTCGC GGCCGTTTGA TGCCGTGTTA
ATGGATATTC AAATGCCAGT GATGGACGGG TTAACGGCTG CAAGGGCATT GCGTGAGCGT
TTTAGTGCCG ATGAACTGCC CATTATTGCC ATGACAGCCC ATGCCATGTC GGGCGATAGG
GAAAAGAGTT TAGCGGCGGG GATGAATGCC CACATTACTA AACCCATAGT GCTCAACGAA
TTATTTGAAA CATTAAATCA CTGGATCAAA CATAAGAATC AGCATCAGAA TCGTTAA
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| Protein sequence | MKSSEPDLQL KSPIQKNYNR AVFYTYIGVI VMSLLTAWMF FDRQKAQQME QREEQVQRHV
LQIDLLLESS IRAVKSLRNV AVDHLRLGEL VRKERLPQYG KFNESGQYFT LEPSYAQSGE
PFTNMGRITG AGSLDGRSDK FYQELEMLFE LSLSFPVAKE AAPKASAIYY LSKRRIMSYF
PWSNDDQRFR DELLNKKQFQ YATPAMNPQR SVFWSEAYVD STGKGLLTTL GVPVYLDDEF
IGSINLDMTL ASLARQIRVY FKMPGTVILL DQQNNILSHS DFDSSDINRV YHISQRIPSE
LHSLPESELF DAHDGIIRNG YYIHSVALHN APWRLLYLQD EDDLFQDSWE KLQLTFILVV
IALSVLVTIV HWQTRRSFVS PASRLLSHLE GCSQEPRKPP EKITRGWEPW FLLVSRIFEE
NKQYTHHLAE QNKRLDKLVA RRTERLKDTT ERREREYALL RSLLDSIPEA IVFKDKEGNY
LGCNKAAERM LGYTESEMIG LSSEDLTSPE MGIRIRAEDE QVLKDRTPLR YQEKVELAGK
PVLLDTLKLP FYNRRGELQG LIAVWRDVTR EYESAEQLRL SEERYHLAMD AVEDGLWDWY
LDSEQIICNP AYYSMLGYKT NEFPALVSTI DELSHPDDRI RVEEYRAQYL ADPVGAYEIE
FRMLGKNGGY HWVLSRGRVV EFTAEGQPKR MLGTHKDITR HKSNEVALLE AKQDAELANL
YKSEFLANMS HEIRTPMNAI IGMLQLAQRT SLTAQQKDYL EKAGFSAQSL LRIINDILDF
SKIEAGKLEL ERVPFPLDKV LDHALDLNAL KAQEQGVELL LYAPVTAGLI LKGDPLRLGQ
VLINLLSNAV KFTQSGEIEL GCEDVGERDH RITLKFWVRD TGIGIGKDQQ DKLFDAFAQA
DGSTTRKYGG TGLGLSISKH LVSMMGGKMQ VQSELGVGST FSFTISFEIA EAAKIEPFVV
PEKLNSLRTL VVDDNPTALQ IYSTLMRDFH FEVDTAASGA EALYKLSRAP IDLLLLDWMM
PEMDGSDVVS AIDTMVAEGR LAKRPVIIMM TAYAAEPLQH EVDSANVFAV LQKPFKASSL
FDEIIAAFAD EPRLNVVQPM VEVQVEDGEH TGLVLLVEDN FINQQVATEL LKSAGYEVVL
AGNGQVALDT IDSRPFDAVL MDIQMPVMDG LTAARALRER FSADELPIIA MTAHAMSGDR
EKSLAAGMNA HITKPIVLNE LFETLNHWIK HKNQHQNR
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