Gene Shew185_3777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3777 
Symbol 
ID5373188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4487277 
End bp4488158 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content51% 
IMG OID640832038 
Producthypothetical protein 
Protein accessionYP_001367964 
Protein GI153002283 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTTCTG CTAAACCTTC GGGATTAATT GAATTACATT TAGCTGTGCT GCTATTTGGC 
GGCACAGCTT TGTTTTCTAA ATTAATCCCA CTCAGTGCCC TCGACATCAC CTTCCTACGC
TGTATCGTCG CCGCCACTGT GTTAGGTTTG CTGGTCAAAC TCAGCCATAG ACGGCTAACG
CTGGCCAGCA AACAAGATTA TCTGGTCGCC ATCGGGCTTG GGGTTATCGT AAGCCTGCAT
TGGGTCACGT ATTTTGCCGC CATGCAACTG TCGTCGGTCG CCATTGGCAT GATTGCGTTT
TTCACCTATC CGGTGATGAC AGTTATTGCC GAGCCGTTGC TGACAGGCAG TAGAATAAAA
TTACTCGATA TCATCAGCGG CGCGTTAGTG CTGATTGGGG TGATATTACT CATCCCAGAG
GCCAATTTAG GTAACGACAC TACGCTGGGC ATTGCCATCG GCATAGTATC CGCCATCTTG
TTCACCGCCC GTAACTTATT GCACAAACGC TACTTTTCCC AGTACAGCGG CCCACATGCC
ATGTTCTACC AAACCTTGGT CGCCGTCGTG TTCCTAATGC CGTGGCACCA AACGGAACTG
AATAGCATCT CACTCGAAGT GTGGGGATTG ATTATTTTAC TCGGCGTCGT CTTTACCGCC
GCGCCCCATG CGCTATTCAC TTCCGCACTG AGGCAACTCA GCGCCAAAAC GGTTGGGCTA
GTCTCTTGCT TACAGCCCTT CTATGGCGCC ATGTTAGCGC TGATTATTTT GGGTGAAGAG
CTCAATCTCA ACACCATAAT CGGCGGCACT ATCATAGTCG CGACCGCCAT CTTCGAAACC
CATCAATCGC ACCAGTCACA GCGGCGAAAA AAGAACGCCT GA
 
Protein sequence
MSSAKPSGLI ELHLAVLLFG GTALFSKLIP LSALDITFLR CIVAATVLGL LVKLSHRRLT 
LASKQDYLVA IGLGVIVSLH WVTYFAAMQL SSVAIGMIAF FTYPVMTVIA EPLLTGSRIK
LLDIISGALV LIGVILLIPE ANLGNDTTLG IAIGIVSAIL FTARNLLHKR YFSQYSGPHA
MFYQTLVAVV FLMPWHQTEL NSISLEVWGL IILLGVVFTA APHALFTSAL RQLSAKTVGL
VSCLQPFYGA MLALIILGEE LNLNTIIGGT IIVATAIFET HQSHQSQRRK KNA