Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3776 |
Symbol | psd |
ID | 5369703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 4486392 |
End bp | 4487270 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640832037 |
Product | phosphatidylserine decarboxylase |
Protein accession | YP_001367963 |
Protein GI | 153002282 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATAAAG TCAAAATTGC GCTGCAGTAC ATGCTGCCGA AACACTTATT ATCTCGTTTA GTGGGTAAAC TCGCCGCAGC CGAAGCGGGC GCGTTAACCA CGGCCGCTAT CAAGTGGTTT ATCAAGCAAT ATAAAATTGA TATGAGCGAA GCGGCGCAAA GTGAGCCTGA AGCCTATAAA AGCTTTAATG CCTTTTTTAC CCGCGCCCTT AAACCCGGTA TTCGTCCGTT AGATATGGAC GCCGATATCA TGGTGCATCC CGTCGATGGC GCCGTAAGCC AATTAGGCCC GATTAAAAAC GGCCGCATCT TCCAAGCTAA GGGTCACCAC TATTCATCGT TAACCTTGCT TGGCGATCAA GCTGAAGATG CTAAACGCTT CGAAGGCGGT GATTTTGCGA CTATTTATCT GGCGCCTAAA GACTATCACC GTATCCACAT GCCGATTAAA GGCACGTTAT CAAAAATGAC TTACGTGCCT GGTGAACTGT TTTCAGTGAA TCCGTTAACG GCCAGAAACG TACCCGGTCT CTTTGCCCGT AACGAACGTG TGGTGGCGAT TTTCGAAACC GAATTAGGTC CATTAGCCAT GGTATTGGTT GGCGCAACGA TTGTTGCCAG TATCGAAACG GTCTGGGCAG GCACAGTCAC GCCGCCGACA GGTAAGCAAG TCTTCACTTG GGAATATCCA ACCCAAGGTC CCGATGCCAT CACCTTAGAC AAGGGCGAAG AAATGGGTCG CTTCAAGTTA GGCAGTACTG TAGTGATGTT GTTTGCTAAA GATGCTATCG CGACCTTTGC TGAAGGTGTC GAAGCCGAAG CTGTAACGCG TATGGGACAA GCCTTCGCTA ACCTGAAAGA CGTTAAGCAC GCGGATTAA
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Protein sequence | MDKVKIALQY MLPKHLLSRL VGKLAAAEAG ALTTAAIKWF IKQYKIDMSE AAQSEPEAYK SFNAFFTRAL KPGIRPLDMD ADIMVHPVDG AVSQLGPIKN GRIFQAKGHH YSSLTLLGDQ AEDAKRFEGG DFATIYLAPK DYHRIHMPIK GTLSKMTYVP GELFSVNPLT ARNVPGLFAR NERVVAIFET ELGPLAMVLV GATIVASIET VWAGTVTPPT GKQVFTWEYP TQGPDAITLD KGEEMGRFKL GSTVVMLFAK DAIATFAEGV EAEAVTRMGQ AFANLKDVKH AD
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