| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3772 |
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| Symbol | |
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| ID | 5373037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4481301 |
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| End bp | 4482785 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640832029 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_001367959 |
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| Protein GI | 153002278 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00405966 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAAG ATCTATCGCA ATTTCCCAAG GCCTTATTTA CCCAAGCACA AGTTCGCCAA
GCTGAACTGA GTGCTGTGTC GCAGGGAGCC TCTAGCCTCT ATGAATTGGT CGAGCGTGCT
GGCGCGGCGG CTTTTGAATG TTTAACAAAA CATAACCTCA ATGCCTCTTC TGTATTTATC
CTCGCTGGCA GCGGTAACAA TGGTGCCGAT GCCTTAGTGT GCGCCCGTTT AGCCCGTGCC
AGTGGTATGG CCGTTTCAGT GATGATGACG TCAGCGGCAG GCACGCCTGA GTGTCAGCAA
GCATTGGCCC ATTATCTTAA AGACGGCGGA GAGTTACTGC CGAAAGCCGT TGCGCCCATT
CTTGCGGCCA AAATCATCGT CGATGGTTTA CTCGGCACAG GTGTGCGAGA TGCGGTGCGC
GATGATATGG CTGAGTATAT TCGTGCCATC AATGACAATG CAGCTTGGGT ATTGAGCCTT
GATTTACCGT CTGGAGTGAT TGCCGATACC GGCGCTGTGG CGGGTGTTGC TGTGATGGCG
GATGTCACCT TGTGTTTTGG TGGCTGGAAG CAAGGTTTGT TAACGGGTAA GGCGCGGCAT
TACAGCGGCG AACTTGAATT TGCCGCTTTA GGATTAACGC CTTTCTTCGC TGAAGCGAGT
GCACAAAGAG TAGGAAGAGA GACGCTTAAA GATTACTTTG CCGCCAGAGC GCGCGATAGC
CATAAAGGCC AGTCGGGTAA GGTCACTGTT ATCGGCGGTG ATATGGGCAT GGCTGGCGCC
GTGCGACTGG CAAGTGAGGC ATGTTTGCGT GCCGGTGCAG GATTAGTCAC AGTGATCAGT
CGACCTGAGC ATCAATTGAC TGTGAATGTC TCTCGTCCGG AATTGATGTT CTGGGGTTGT
GACTTAGTCG ATATGGAAGT GTATCTGCGC CTTGGTTGGG CGCAGGTTAT CGTACTTGGT
CCTGGTTTAG GTAAGCATGA CTGGGGCTAT AACTTGTTTA AAGCCGTGGG CTTAAGCGAT
AAACCCTGTG TTTTGGATGC CGATGCCTTA AATCTATTGA GCAATGAACC TCGGTGGCAA
ACCAATTGGG TGCTAACACC GCATCCGGGT GAGGCTGCGC GTTTACTCGG CTGCTCTGTG
GCAGAAATTG AGCAGGATAG GTTTGCGGCT GTACGGGTGA TACAGCAAAA GTACGGTGGT
GTTGTACTGC TAAAAGGCGC GGGAACGGTC ATTTTTGATG GCAAACAAAT GGTTGTTGCG
CCTGTCGGTA ATCCTGGGCT TGCCAGTGGT GGGTGTGGCG ATGTGTTATC TGGTATTATA
GGCGCGCTCA TGGCTCAAGG AATGGATAAC ATGCAGGCGA CTGTGCTGGG TGTTGTTGTA
CATGGTTGCG CTGCCGATCT TGCGGCAATA CAGGGAGAAC GTGGCATGTT AGCGAGCGAT
TTAATGCCTT TTATTCGCCA ATTAGTGAAT AGTGATTTAC TCTAG
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| Protein sequence | MAQDLSQFPK ALFTQAQVRQ AELSAVSQGA SSLYELVERA GAAAFECLTK HNLNASSVFI
LAGSGNNGAD ALVCARLARA SGMAVSVMMT SAAGTPECQQ ALAHYLKDGG ELLPKAVAPI
LAAKIIVDGL LGTGVRDAVR DDMAEYIRAI NDNAAWVLSL DLPSGVIADT GAVAGVAVMA
DVTLCFGGWK QGLLTGKARH YSGELEFAAL GLTPFFAEAS AQRVGRETLK DYFAARARDS
HKGQSGKVTV IGGDMGMAGA VRLASEACLR AGAGLVTVIS RPEHQLTVNV SRPELMFWGC
DLVDMEVYLR LGWAQVIVLG PGLGKHDWGY NLFKAVGLSD KPCVLDADAL NLLSNEPRWQ
TNWVLTPHPG EAARLLGCSV AEIEQDRFAA VRVIQQKYGG VVLLKGAGTV IFDGKQMVVA
PVGNPGLASG GCGDVLSGII GALMAQGMDN MQATVLGVVV HGCAADLAAI QGERGMLASD
LMPFIRQLVN SDLL
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