Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3770 |
Symbol | |
ID | 5370160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4479310 |
End bp | 4480731 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640832027 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_001367957 |
Protein GI | 153002276 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000747673 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAA ATAACCCTTA TTTTCAAATT ATTATTCTTT CTTTATGTTC TTTTTTATCT GTGGCGGCCC ATGCGGCTAA TCAGTTAGAA AGCGTACGTA TTTGGGCTGC GCCTGAGTCG ACTCGAATCG TGTTTGATTT AAGTGAAGCG CCAGATTACA CCTATTTCTC TTTAGATGGC CCTAATCGCT TAGTGGTGGA TTTAAAAAAG TCCGCCACTA AAGTTGCGCT TAAAAATCTT GAAAACAATA GTAAGTTAGT CAAGGGCGTG CGAGTCAGTA AGTCGCCGAC TAAGGGCGAT TTACGCTTAG TAATCGATTT GGTGAAGCCA CTGAATGCGA GCTTGTTCTC GTTACCTGTG ACTGCGCCCT ATGGCAATCG TCTGGTGGTT GATTTAGAAG ATAAAACCTT AACAACCGCA ACCGCAGTTG TCTCATCCAC ACCCGTTAAA ACCGTTACCC AAGCGGCGCA ATCATCCCGC GATATCGTGA TTGCTATCGA TGCGGGTCAT GGCGGCGACG ACCCCGGCTC CATTGGCCCT TCTGGCGTTT ACGAAAAAAA GGTTGCTCTA GAAATCGCCA GACGTGTTTC GAGTAAAATC AATGACACGC CTGGCATGCG CGCTGTGATG ATCCGCACCG GCGATTATTT TGTGAATTTG AATAAGCGCT CTGAGTTGGC CCGTAACAGT AAGGCCGATC TGCTGATTTC TATCCATGCC GATGCTTTTA CTTCCCCGAA TCCTCGCGGC GCCTCTGTGT GGGTATTATC CATGCGTCGG GCTAACAGTG AAATTGGCCG TTGGTTAGAG CAAAAAGAAA AGCATTCTGA GTTACTTGGC GGCGCGGGTG AGATTATCCA AAACACGGAT AATGAACAGT ATTTAGCCAT GACGCTGCTC GATATGTCGA TGAACAGTTC GATGGCCATT GGTCATTCAG TCGCTGGCGA TATTCTTAAG GATTTAGGCG GCGTGACTGA TTTACACAAG AGTCGCCCCG AGTCGGCGAG TTTAGCTGTG CTGAAATCGC CGGATATTCC TTCTATCTTG GTGGAAACGG GCTTTATTTC GAATCCGAAA GAAGAGCGTT TGCTGTCGAG TAGTCGTCAT CAAGAAAATA TCGCCAATGC TATTTATAAG GGTGTGAGTC GTTACTATCA CAATAATCCG CCAGCGGATA CCTTGCTTGC CCAGCGAGGC GGCGCTAGCT CTAGCAGTGC TAAATCGACT AAAGAGAGAA CGCCAACCGC TTATGTGGGG AGTTCAACGT CATCGAACGT CAAACATAAA GTCAGTCGTG GCGAGTCTTT ATCGGCTATC GCGCAGCGTT ATCGAGTGCC TATGTCTAGC ATCAAACAAG CGAATGGGAT GAAGTCCGAT GTGGTGCAGT TAGGACAAAC GTTAGTCATA CCCCAGAGTT AA
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Protein sequence | MIKNNPYFQI IILSLCSFLS VAAHAANQLE SVRIWAAPES TRIVFDLSEA PDYTYFSLDG PNRLVVDLKK SATKVALKNL ENNSKLVKGV RVSKSPTKGD LRLVIDLVKP LNASLFSLPV TAPYGNRLVV DLEDKTLTTA TAVVSSTPVK TVTQAAQSSR DIVIAIDAGH GGDDPGSIGP SGVYEKKVAL EIARRVSSKI NDTPGMRAVM IRTGDYFVNL NKRSELARNS KADLLISIHA DAFTSPNPRG ASVWVLSMRR ANSEIGRWLE QKEKHSELLG GAGEIIQNTD NEQYLAMTLL DMSMNSSMAI GHSVAGDILK DLGGVTDLHK SRPESASLAV LKSPDIPSIL VETGFISNPK EERLLSSSRH QENIANAIYK GVSRYYHNNP PADTLLAQRG GASSSSAKST KERTPTAYVG SSTSSNVKHK VSRGESLSAI AQRYRVPMSS IKQANGMKSD VVQLGQTLVI PQS
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