Gene Shew185_3765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3765 
Symbol 
ID5373461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4473616 
End bp4474755 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content47% 
IMG OID640832022 
ProductHflK protein 
Protein accessionYP_001367952 
Protein GI153002271 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01933] HflK protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000022736 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTGGA ACGAGCCCGG TAACAAGGGT AATGATCCTT GGGGAAATAA AGGTGGTAAC 
GACAAAGGAC CACCGGACCT TGACGAGGTT TTTCGTAATC TTTCAAAGCG CTTTGGCGGC
AAAGGAAACG GCTCAGGCCA ATCTTTTAGC TCGTTTAGCC TAATCATCAT TCTTGCTGTT
GCTGTAGTTG TTTGGGGACT TTCGGGTTTT TATACAATTA AAGAAGCTGA GCGTGGTGTG
GCACTGCGAT TTGGTAAACA CGCTGGCGAA ATTGGCCCTG GACTTCATTG GAAAGCCACA
TTTATCGACC AAATTTATCC CGTCGACATT CAATCGGTTC GCTCTATTCC TGCGTCTGGT
AGCATGCTGA CATCCGATGA AAACGTCGTG AAAGTTGAGC TTGATGTTCA GTATCGTATT
TTAGATGCTT ACTCATATCT ATTTAGTGCC GTCGATGCGA ACGCCAGCTT GCGTGAAGCG
ACTGACAGTG CACTGCGTTA TGTCATTGGA CATAACAAGA TGGATGATAT TCTGACTACC
GGCCGTGATG CTATTCGTCG CGATACGTGG AAAGAGTTAG AGCGCATTCT TGAACCGTAC
AAATTGGGTC TTGCTGTTGT TGACGTCAAC TTCTTACCGG CGCGTCCGCC TGAAGAAGTG
AAAGACGCCT TCGATGACGC GATTTCTGCC CAAGAAGATG AACAACGTTT TATTCGTGAA
GCTGAAGCCT ATGCCCGTGA AATTGAACCA AAAGCTCGTG GTGAAGTTGA ACGTATGGCA
CAACAAGCGA ATGCTTATAA AGAGCGTGAA GTCTTAGAAG CTCGCGGTAA AGTTGCTCGT
TTTGAGCTGT TATTACCTGA GTACCAAGCC GCGCCTGACG TGACTCGCAA GCGTTTGTAT
CTCGATACAA TGCAGCAAGT GATGACAGAT ACGAATAAAG TGCTGATTGA TGCCAAGAAC
AACGGCAACT TAATGTACCT ACCGCTAGAT AAGTTAATTC AGCAGAAGCC TGCGACAACT
GAGCTGGAAG CTAAGCCACA GCAAAATGTC AATTCTTCAT CTGTATCAAC GACTCGCGCG
AATGAGCCTT TGAGTGGACG TCCATCCCGC GATGATCGTA CTCGCCAAGG GAGGGAGTAA
 
Protein sequence
MAWNEPGNKG NDPWGNKGGN DKGPPDLDEV FRNLSKRFGG KGNGSGQSFS SFSLIIILAV 
AVVVWGLSGF YTIKEAERGV ALRFGKHAGE IGPGLHWKAT FIDQIYPVDI QSVRSIPASG
SMLTSDENVV KVELDVQYRI LDAYSYLFSA VDANASLREA TDSALRYVIG HNKMDDILTT
GRDAIRRDTW KELERILEPY KLGLAVVDVN FLPARPPEEV KDAFDDAISA QEDEQRFIRE
AEAYAREIEP KARGEVERMA QQANAYKERE VLEARGKVAR FELLLPEYQA APDVTRKRLY
LDTMQQVMTD TNKVLIDAKN NGNLMYLPLD KLIQQKPATT ELEAKPQQNV NSSSVSTTRA
NEPLSGRPSR DDRTRQGRE