| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3759 |
|---|
| Symbol | |
|---|
| ID | 5371350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 4468681 |
|---|
| End bp | 4469118 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640832016 |
|---|
| Product | ClpXP protease specificity-enhancing factor |
|---|
| Protein accession | YP_001367946 |
|---|
| Protein GI | 153002265 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2969] Stringent starvation protein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0011866 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTT TGACTCCAAA TCGTCCTTAT TTACTAAGGG CTTACTATGA TTGGTTGATG
GACAACCAAT TGACTCCTCA CGTTGTGGTG GATGCCTTTG TTGAAGGCAC TCAAGTACCG
CAGCAATACG TGAAGGATGG CCAGATAGTG TTGAATATCG CTGCTGGCGC AGTGGGCAAT
TTGCAAATTA GCAATGAGTT TGTGGAGTTC AATGCGCGTT TCGGTGGTGT TCCCCAGCAG
GTGATGTTGC CAATGGCGTC GATTGTCGCT ATTTATGCCC GTGAAAACGG TGCTGGCACT
GTCTTCGATA TTGAAGATGC TTACCTGGTG GACGATGAAG TCGATTCATC TTTATCGGTT
GTTGAAACAA ACGATAAAGC ACCTGAGCCG ACTGATGAAC CACCTAAGCG TCGCAGCCAT
TTAACCGTCG TAAAATAA
|
|---|
| Protein sequence | MKPLTPNRPY LLRAYYDWLM DNQLTPHVVV DAFVEGTQVP QQYVKDGQIV LNIAAGAVGN
LQISNEFVEF NARFGGVPQQ VMLPMASIVA IYARENGAGT VFDIEDAYLV DDEVDSSLSV
VETNDKAPEP TDEPPKRRSH LTVVK
|
|---|
| |