Gene Shew185_3750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3750 
Symbol 
ID5373584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4456331 
End bp4457659 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content49% 
IMG OID640832007 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001367937 
Protein GI153002256 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTCGA TCCGCACTAA GCTCAGTTTA TGGTTAACGG GCTTACTGGT AATAGGCACA 
GTCATTGGGC TCATATTATT TGAGTCCATG CTGCGTCAGG CCTTCCATGA CTCTATTATC
AATCGCTTAG AAGAGGATCT CGAACATATT ATGTTGGCAA CCCATATCCA CGATGGGGAC
ATCAGCATAG ATCAAAGCCA GCTTTCCAGT TTCTATAAGC CCGCCTATTC AGGCCGCTAT
TTCCAGCTTA ACCTGCCTAA TGAAGTCATT CGCTCGCGCT CCCTGTGGGA TATGCAGTTA
GATATCGAGC CACTCGCGCC GAATAAAACC CGTGTCTGGC AAGCTAAAGG GCCAAAAAAT
AACGATATGC AGCTGTTATC ACTGGGATTA AATTCCAGTA GTGCCAATGT CAGCGCTACC
TTAACCGTCG CCCAAGACTT GAGTATCGGC AGACGCGTAT TTAGCGAAGT CTATGGCACT
AAGCTTGGGA TCAATCTGGC GATGTTAGTT GCTATGATCG CGGGGATCTT CCTGATCCTG
CGCCAATCCT TTAAGCCAGT TAAGCATATT CAGCACGCGC TTTCGCGGCT AAGAGAAGGC
GAAATTAACG CGCTGGAGCT GAATAACATC CCCCCCGAAG TGCAGCCACT CGCTAAGACT
TACAACGAGT TACTCGAGTA CACCGCCAAG CAAATTGAGC GTAGCCGCAA TAACTTAGGT
AACTTAAGCC ATGGGCTTAA AACCCCGCTG GCCGTGATGC AGCAACAGGT CGAAGCCCTT
GGTCTTAAAG ATCCTGAAAC CGCCATTGCC TTGCAGCAAC AGCTGGATTC TATCCACAAG
ATGGTCGAGC GCAAACTGGC CGCGGCAAGG ATCACTGGCG ATATGCTTCC TGCGGCGCAA
TTGGTGATCC CAAGGGATTT ACACAGCCTA GCCAACACCT TAAACAAGGT TCACCGCAAT
AAAACCATCG AATGTGATTT CGAACTCGAC CCTAATATTC TCAGGCTGCC GATCCACAGG
GAAGATGGCA TGGAGCTCCT AGGCAATCTG CTGGACAACG CCTTTAAATG GGCCCAGAGC
CGAGTCAGTA TTCAGCTATC ACGCCAACAG GAACGTCTCT GCCTTTGTAT CGATGATAAT
GGTCCTGGGG TTGCCGATGA TGAACTCGAT AAACTCACCC AAAGAGGCAC TCGATTAGAT
GAGTCTGTCA TGGGTCACGG CTTAGGCTTG TCGATAGTGA AGGAAATTGC CGAACAGTAT
GAGATTGGGC TTAAGTTTAG CCACAGCACT CGCTTAGGTG GACTGAGGAT CGAACTGACC
TTCAGTTAG
 
Protein sequence
MISIRTKLSL WLTGLLVIGT VIGLILFESM LRQAFHDSII NRLEEDLEHI MLATHIHDGD 
ISIDQSQLSS FYKPAYSGRY FQLNLPNEVI RSRSLWDMQL DIEPLAPNKT RVWQAKGPKN
NDMQLLSLGL NSSSANVSAT LTVAQDLSIG RRVFSEVYGT KLGINLAMLV AMIAGIFLIL
RQSFKPVKHI QHALSRLREG EINALELNNI PPEVQPLAKT YNELLEYTAK QIERSRNNLG
NLSHGLKTPL AVMQQQVEAL GLKDPETAIA LQQQLDSIHK MVERKLAAAR ITGDMLPAAQ
LVIPRDLHSL ANTLNKVHRN KTIECDFELD PNILRLPIHR EDGMELLGNL LDNAFKWAQS
RVSIQLSRQQ ERLCLCIDDN GPGVADDELD KLTQRGTRLD ESVMGHGLGL SIVKEIAEQY
EIGLKFSHST RLGGLRIELT FS