| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3746 |
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| Symbol | |
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| ID | 5372311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4453404 |
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| End bp | 4454183 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640832003 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001367933 |
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| Protein GI | 153002252 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.16618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATACA GATTATGGGT TTTAGGTGCA GGTTTAAGCT TAACGATAGG GCTTAGCTCT
GCGGCGCACG CATTTTCTAT CCCGCAGCCT GCTGCCGAAC TCGCAGCCAG TAAGTTTGTG
CATATACAGG TGACGGCAGA GCAAGGCGAC GCCGATGCCC AATTTTTGCT GGGATTAATG
TATCTTTCTG GCCGTTTTGT GGCGCAAGAA GTGCCCTCTG GTTTGCACTG GATTTCACTT
GCCGCCGAGC AGCAACATGA AAAAGCCCAG CAAACCTTAG CCGACCTGTC TTTTGAAGGC
CAATTGATCA AGCGTGACTT ATCCGTGGCC GAGCATTGGT ATCGAGCCTT GAGTGAGCAG
GGCAGTCGTT GGGCACAATT CCGTTTAGGC TTTATTTATG CCTCTGGCGG CGATGGCGTG
CAACGTAACT GTGGTAAAGC GGTCGAGCAA TTTTCCCAAG TGGGTGATGA TGTTGCCTTA
GGTAATGTGG CGTGGATTTT AGCGACTTGC CCTGAAGCTG AGTATCGCGA TGGCAATAAA
GCGGTCGAGT TATCCTTAAA GTTGCTCAAA GTGAATCAAA ACGACCCGAC AAATTTAGAT
AATCTGGCGG CGGCTTATGC CGAAGTCGGC GATTTTGGTG CGGCAATTTC GACGCAGCAA
AAAGCAATTG AAGCGTTAAA GATGAGCGCT GAAATGACTA AGACAGATGA ATTTATGCAG
CGTTTACAAA CTTACGAGCA AAAGCGTGCG TATCGCGAAA CCTTACGTTT ACTCGAATAA
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| Protein sequence | MKYRLWVLGA GLSLTIGLSS AAHAFSIPQP AAELAASKFV HIQVTAEQGD ADAQFLLGLM
YLSGRFVAQE VPSGLHWISL AAEQQHEKAQ QTLADLSFEG QLIKRDLSVA EHWYRALSEQ
GSRWAQFRLG FIYASGGDGV QRNCGKAVEQ FSQVGDDVAL GNVAWILATC PEAEYRDGNK
AVELSLKLLK VNQNDPTNLD NLAAAYAEVG DFGAAISTQQ KAIEALKMSA EMTKTDEFMQ
RLQTYEQKRA YRETLRLLE
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