| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3711 |
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| Symbol | nrfA |
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| ID | 5371046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4406263 |
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| End bp | 4407666 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640831968 |
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| Product | cytochrome c552 |
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| Protein accession | YP_001367898 |
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| Protein GI | 153002217 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
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| TIGRFAM ID | [TIGR03152] formate-dependent cytochrome c nitrite reductase, c552 subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000131094 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAGA AGATGACAGG TAAGTCCTTT GCACTAAGTG CACTGGTTGC CGCCAGCTTC
ATGGCGGCGG GCGCAATGGC GAGTGATAAA ACTGAGCCTC GCAACGAAGT TTATAAAGAC
AAATTTGCTA ATCAATACGC TAGCTGGCAT GACACAGATA AAAGCACTGA AAATACCGAT
GTGTTAGCCT CGGACCCGAG CTTAGTCGTG CTGTGGGCAG GTTATGGTTT TGCGAAAGAT
TACAACGCAC CACGTGGCCA CATGTATGCC ATTACGGATG TGCGTAACAC TCTGCGAACT
GGCGCACCAG CCAACGCGGA AGATGGTCCA ATGCCTATGG CTTGTTGGAG CTGTAAGAGC
CCTGATGTAC CTCGCTTAAT TGAAGAGCAA GGCGAAGATG GTTACTTTAA AGGTAAATGG
GCCAAGGGCG GCCCAGAAGT CGTCAATACT ATAGGCTGCG GCGACTGCCA TGAGAAAGGC
ACGCCTAAAC TGCGTATCTC TCGCCCCTTT GCTGAACGTG GTATGGAAGC ATTAGGTACA
CCGTTTGCCA AAGCGTCTAA AAAAGACAAG CAATCTATGG TCTGCGGTCA GTGTCACGTT
GAATACTATT TCGAGAAAAA AGAAGGCAGA AAAGGTTTCG TTAAATTCCC TTGGGATATG
GGCACAACCG TTGAGCAAAT GGAAACCTAT TACGACGGTA TTGAGTTCTC CGACTGGACG
CATGCGCTGT CTAAAACCCC TATGTTAAAA GCGCAGCACC CTGGTTATGA AACTTGGAAA
CTCGGTGTTC ATGGTAAGAA CGATGTGAGC TGTGTTGATT GTCACATGCC AAAAGTGACT
AACGACAAGG GTCGTAAGTA CACAGATCAT AAAGTGGGTA ACCCATTTGA TCGTTTTGAA
GAAACCTGCG CGACGTGCCA CAGCCAAAGT AAAGAGTTCT TAGTCGGCTT GACCAACGAA
CGTAAAGCGA AAGTAAAAGA GCTTAAAGGC CGCGCCGAAG CACAACTGGT GAAAGCGCAC
TTTGAAGCCG CAGCCGCTTG GAAAGCGGGG GCAACTGAAG CGGAAATGAA GCCTATTCTA
ACCGATATCC GTCATTCACA ATGGCGTTGG GACTATGCGA TTGCTTCACA CGGCGCTGCT
GCTCACGCTC CTGAAGAAGT CTTACGTATT TTAGGTACCG CGGTAGATAA AGCGGCTGAT
GCGCGGGTTA AATTAGCGCA ACTGTTGGCG AAAAAAGGCA TCACAGATCC TGTCGCTATC
CCTGATATTT CGACTAAAGC TAAGGCACAA GCCGCTTTAG GTATGGACAT GGAAAAAATG
AATGCTGAGA AAGAAGCATT TAAGAAGGAC ATGTTACCTA AGTGGGATGA AGAAGCGAAA
AAACGCGAAG CCACTTATAA ATAA
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| Protein sequence | MMKKMTGKSF ALSALVAASF MAAGAMASDK TEPRNEVYKD KFANQYASWH DTDKSTENTD
VLASDPSLVV LWAGYGFAKD YNAPRGHMYA ITDVRNTLRT GAPANAEDGP MPMACWSCKS
PDVPRLIEEQ GEDGYFKGKW AKGGPEVVNT IGCGDCHEKG TPKLRISRPF AERGMEALGT
PFAKASKKDK QSMVCGQCHV EYYFEKKEGR KGFVKFPWDM GTTVEQMETY YDGIEFSDWT
HALSKTPMLK AQHPGYETWK LGVHGKNDVS CVDCHMPKVT NDKGRKYTDH KVGNPFDRFE
ETCATCHSQS KEFLVGLTNE RKAKVKELKG RAEAQLVKAH FEAAAAWKAG ATEAEMKPIL
TDIRHSQWRW DYAIASHGAA AHAPEEVLRI LGTAVDKAAD ARVKLAQLLA KKGITDPVAI
PDISTKAKAQ AALGMDMEKM NAEKEAFKKD MLPKWDEEAK KREATYK
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