Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3685 |
Symbol | |
ID | 5371847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4380415 |
End bp | 4381350 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640831943 |
Product | malate dehydrogenase |
Protein accession | YP_001367873 |
Protein GI | 153002192 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.184642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTG CTGTACTTGG TGCTGCTGGT GGTATCGGCC AGGCTCTTGC CCTACTGTTA AAAACTCAAC TGCCTGCGGG TTCACATTTG TCTCTATATG ATATCGCACC GGTTACTCCG GGTGTTGCGG TTGACTTGAG CCACATCCCT ACTGCTGTTG AAATCAAAGG TTTTGCTGGT GAAGATCCAA CGCCTGCCCT CGTGGGTGCT GACGTTGTTC TAATTTCTGC TGGTGTTGCG CGTAAGCCTG GTATGGATCG TTCAGATCTG TTCAATATCA ATGCCGGTAT CGTTCGCAAC CTGATCGAAA AAGTAGCGGC AACTTGCCCT ACGGCTTTGG TTGGCATTAT CACTAACCCA GTCAACACTA CTGTCGCTAT CGCTGCAGAA GTGATGAAGA AAGCGGGTGT TTACGATAAG AACCGTCTGT TCGGTATCAC GACATTAGAC GTGATCCGTT CTGAAACCTT CATCGCCGAA TTAAAAGGCC TGAACGTTGC TGACGTTAAA GTCAATGTGA TCGGCGGCCA CAGCGGCGTG ACCATTCTGC CATTACTGTC TCAAGTTGAA GGCGTGACTT TCACTGACGA AGAAGTGGCC AGTCTGACTA CTCGCATTCA AAACGCGGGT ACAGAAGTGG TTGAAGCTAA AGCCGGTGGC GGAAGCGCGA CTCTGTCTAT GGGTCAAGCG GCTTGCCGTT TCGGTCTGTC TTTGGTTCGT GGTCTGCAAG GCGAAGCTAA CATCGTTGAA TGCGCCTATG TTGACGGCGG TAGCGAGCAC GCTGAATTCT TTGCACAACC TGTGCTGTTA GGCAAAAACG GTATTGAAAA AGTACTGCCT TACGGTGAAG TGAGTGCATT CGAAGCTAAC GCTCGTGATT CTATGTTAGA TACGCTGAAA GGCGATATCA AACTAGGCGT TGATTTCGTT AAATAA
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Protein sequence | MKVAVLGAAG GIGQALALLL KTQLPAGSHL SLYDIAPVTP GVAVDLSHIP TAVEIKGFAG EDPTPALVGA DVVLISAGVA RKPGMDRSDL FNINAGIVRN LIEKVAATCP TALVGIITNP VNTTVAIAAE VMKKAGVYDK NRLFGITTLD VIRSETFIAE LKGLNVADVK VNVIGGHSGV TILPLLSQVE GVTFTDEEVA SLTTRIQNAG TEVVEAKAGG GSATLSMGQA ACRFGLSLVR GLQGEANIVE CAYVDGGSEH AEFFAQPVLL GKNGIEKVLP YGEVSAFEAN ARDSMLDTLK GDIKLGVDFV K
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