| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3656 |
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| Symbol | |
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| ID | 5370161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4342966 |
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| End bp | 4344327 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640831914 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001367844 |
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| Protein GI | 153002163 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTAAAG CACCCAAAAC ATTGCAACAA CGCATGAGCA TAGTCGCCCT CACTTGGCCG
ATTTTTGTCG AGACCTTGCT GCAATCACTG CTTGGGATCA GCGACATTTT TATGCTCAGC
CATTATTCCG ATAACGCGGT AGCGGCGGTG GGACTCACGA CTCAGCTGAT GTTCTTCATG
ATGGTTATGT CGATGATGGT GAGCACAGGT GCGAGCATTT TGATTAGCCA GAACAATGGC
GCAGGCCAGT CGCAACAGGC GGTCGATATC GGGGTTGCAA GTGTCGCATT GAGCTTAGGA
CTCGCCTTGA TCATGGGCGC CTCTATGTTC TTCGGTGCTA AGGGTGTTAT CGGCCTGTTT
GCGCTTGAAC ACGATGTGGC AGGCTTTGGA TATGACTACT TAGTGATTTG CGGCAGCTTA
AGTATAGGCT TGGTCATGAA CATCGCTTTT GCCGCGATTT TAAGGAGTTA CGGCTTTACC
CGCTCGGCCA TGTTAGTCAC CTCAAGCACA GGCTTGATGA ACGTTATCGG TAACTATATT
GCCCTGTATT CTCCCTTTGA CTTGCCTGTT TATGGGGTAA CAGGGGTGGC AATTTCCACC
GTCACCAGCC AGATCATCGG CGCTGTGATC ATGCTGATGG TGATCCGCTA TAAAAAGATC
CCGCTGCCAC TGCAACGGCT TAAATTATTA CCGCGCAGCA CTTATTGGAG CGTGATGCGT
ATCGGCTTGC TCAATGCTGG CGAGATGCTG TCTTACAATG TAGCGCAGAT GACCATTATC
TATTTTATCA GTCAGATGGG GACGTTATCG CTCACGGCTT ATACCTATGG GCTAAACATC
AGCCGGTTTA TTTATTGTTT TGCGGTGGCG CTCGGGCAGG CGACGCAAAT TCAGACCGGA
TACTATGTCG GCAAACAATG GTTCGATGAA ATCACTGCGA GAGTGCAACG CTACTGTCTG
GTGGGTTTTA TCGCTTCGCT GGCCATAGTC TTAGTCTTCT ACTGGCAGCG ATTCACTATT
GTTGGCTGGT TAAGTGAGAA CGAGGAAGTC ATCCAACTGA CGGCGTTATT ACTGGCAGGT
TCTATCGCGC TTGAAACGGG GCGGGTATTT AATCTGGTGA TTATTTCGGC ATTAAAAGGT
GCGGGTGATG TGGCGTTCCC TGTGCGGGTT GGCCTCTTTA GCATGTGGGG CATAGGGGTA
TTATTGGCTT GGTTCTTTGG CCTTCACTTA GGCTATGGCG TACTCGCCGC TTGGCTTGCC
GTCGCCGCCG ATGAGTGGAT ACGCGGCCTG ATTATGGTAT ACCGCTGGCG CTCGTGCCGT
TGGCAACGTT TTACTCGAAT ACCCGCTGTG ACTGCAGTGT AA
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| Protein sequence | MAKAPKTLQQ RMSIVALTWP IFVETLLQSL LGISDIFMLS HYSDNAVAAV GLTTQLMFFM
MVMSMMVSTG ASILISQNNG AGQSQQAVDI GVASVALSLG LALIMGASMF FGAKGVIGLF
ALEHDVAGFG YDYLVICGSL SIGLVMNIAF AAILRSYGFT RSAMLVTSST GLMNVIGNYI
ALYSPFDLPV YGVTGVAIST VTSQIIGAVI MLMVIRYKKI PLPLQRLKLL PRSTYWSVMR
IGLLNAGEML SYNVAQMTII YFISQMGTLS LTAYTYGLNI SRFIYCFAVA LGQATQIQTG
YYVGKQWFDE ITARVQRYCL VGFIASLAIV LVFYWQRFTI VGWLSENEEV IQLTALLLAG
SIALETGRVF NLVIISALKG AGDVAFPVRV GLFSMWGIGV LLAWFFGLHL GYGVLAAWLA
VAADEWIRGL IMVYRWRSCR WQRFTRIPAV TAV
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