| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3644 |
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| Symbol | |
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| ID | 5372473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4327982 |
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| End bp | 4329943 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640831902 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001367832 |
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| Protein GI | 153002151 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.388894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAACAA ATCCAACAAA AATCGCGCTG CTGATCGGTA GCCTTTGCAG TTTTTCCGTT
ATCGCGCCCG CTATGGCGGC TGACGCTAGC AGCACAGCGA AAGTCGACGA GCATCTTGTC
GTGATCGGCC GCTCTGACAA TACCCCGTTA AATATTGCCG CGAATGTGAA TGTGATTGAC
GCTGCGGCGA TTGAAATGAG CGGTGCCACT AGCGTGACTG AGGTTTTACG CGGTCAAAGC
GGTATTCAAA TTTCGGATAA TAACATCGGT ACTAGTTTTG CGATGCGTGG CTTTAGCGCC
AGCACTGCTG TGAATAACAC GCTGATTTTA CTTGATGGTC GTCGCCTCAA TAATATCGAT
ATCGCTGCCC CTAGTCTTAA TGCCATTCCG CTTAACCAAG TCGAGCGCAT CGAAATTTTA
TCGGGTAGTG CGGGTGTGCT TTATGGTGAC CAAGCGGTAG GCGGGGTGAT AAATATTGTC
ACTAAATCCC CTGAAAATAC CGGCGGTAGC GTACAGTTAT CCGGTGGCAG CTTTGATACC
TATGAAGGTC GCGGTGATGT GTCTGGCGCG ATCAACAAAG ATTGGCGTTA CTTTTTCACC
GGTAGTTACA ACCAAGGTGA CAACTATCGC CAGCATAATG CCAACGAAAC TGGCTCTATT
CTTGGCCGCA TTCAATATAA AACGGCCACA GACTCGTTCT TCGTTGAAAC CAGCTATTAC
GACGATGACC GTGAAAATCC TGGCTCGCTT ACTAAAGATC AATTTAAAGA CAACCCACGT
GACTCTGGGA ACCAGAAGCA ATATTCTCAC GAAATGACCA CTGCGGCGCG TACGGGTTAC
CAGCATCAGC TTAATCAAAA TTGGGCTTTA GCAGCGGATT TAGATTATAG CGATACCTTA
GTGTCTTCTT TTAATTGGGG GGCGAACAGC CATAACACGC GCTCACTGTT GATGTTTAGC
CCTAAAGCGT TAGCGAACTA CAGTACCCGT CAAGGTGAGC TAAATCTAGT CACAGGCTTA
GACATCAGCC GTGGTAAGGC TGATTTTGAC ACTATGGCGC GGAGTAATGT ACAACAAATG
CAAAGCGCCT ATCTACAAGC CACTGTGCCA TTAAGCCATA CCCTAAGTTA TGTTGTGGGT
GGTCGTTATG CGCGGGTGAC CGACGAGTTA GTCGATGGTA ATGTCTATCC TAATGGCATG
GATTTAGATG AAGATGCGAC AGCATTCGAG TTTGGCCTGA ACTACCGTCC TAGTACAGAG
CACAGATTCT ATCTACGTGG CGATGAAAAC TTCCGTTTTG CGAAAGTGGA TGAGCAAGCT
TATACCTCTA AAAATGTGTT TGGCTTAAAG CCGCAGACGG GCCGCTCCTA CGAAGCGGGT
TGGGATTGGA CTCTTGCGAG CCAAACTTTA CGAGTAAGCC TATACCGTCT CGATTTGGAA
GATGAAATTG TCTTCGACCC AAGTGCGGAA AAACCTGAAC TTGGCAGTTT CCAAGGTGCG
AACGTTAATG CCGACGCTTC TCGTCGTTAT GGCGCGAGTG CCGATTGGGA TTGGCAGGTG
ACTCAAGCAA TGCAACTCGG GTTAGAGTAT AACTATATCG ATGCTGAATT TACTGACGGT
ATCAATGATG GCAAGGAGCT GTCTTGGGTG GCAAAACACA CGGGGCGTGG TTATGTCAGC
ATGGATTTTG CTGAGCATTT CCAAGTCTTT GCCGAAGCTA TCTACACGGG TGATCGTTTT
ATTGAAGGCG ATAACGGTAA CGAAGGCGAT AAGCTGGCCA GTTATGTGCT TGGTAATTTA
GCCTTGAACT ACAACCGTGA TGCTTGGCTT GCCAGTCTGC GTATCGATAA CCTATTTGAT
AAAGACTATG TTAGCGCAGG CTATTATGGT GGTGGAATAT ATAATGGTTA TTACTCAGGC
CGTGGTCGCG ATATTCGTTT AACCCTTGGT TATCGTTTTT AA
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| Protein sequence | MGTNPTKIAL LIGSLCSFSV IAPAMAADAS STAKVDEHLV VIGRSDNTPL NIAANVNVID
AAAIEMSGAT SVTEVLRGQS GIQISDNNIG TSFAMRGFSA STAVNNTLIL LDGRRLNNID
IAAPSLNAIP LNQVERIEIL SGSAGVLYGD QAVGGVINIV TKSPENTGGS VQLSGGSFDT
YEGRGDVSGA INKDWRYFFT GSYNQGDNYR QHNANETGSI LGRIQYKTAT DSFFVETSYY
DDDRENPGSL TKDQFKDNPR DSGNQKQYSH EMTTAARTGY QHQLNQNWAL AADLDYSDTL
VSSFNWGANS HNTRSLLMFS PKALANYSTR QGELNLVTGL DISRGKADFD TMARSNVQQM
QSAYLQATVP LSHTLSYVVG GRYARVTDEL VDGNVYPNGM DLDEDATAFE FGLNYRPSTE
HRFYLRGDEN FRFAKVDEQA YTSKNVFGLK PQTGRSYEAG WDWTLASQTL RVSLYRLDLE
DEIVFDPSAE KPELGSFQGA NVNADASRRY GASADWDWQV TQAMQLGLEY NYIDAEFTDG
INDGKELSWV AKHTGRGYVS MDFAEHFQVF AEAIYTGDRF IEGDNGNEGD KLASYVLGNL
ALNYNRDAWL ASLRIDNLFD KDYVSAGYYG GGIYNGYYSG RGRDIRLTLG YRF
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