| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3640 |
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| Symbol | |
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| ID | 5373111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4321811 |
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| End bp | 4324081 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640831898 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_001367828 |
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| Protein GI | 153002147 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTAA ATAGTCTTGG GTTTCCCCGT ATCGGACGTC GTCGTGAATT GAAATTTGCC
TTAGAAAAAT ACTGGCGTGG AGAGATCACT CAAGCTGAAC TGCGTGAAGT GGCGAGCGAA
CTGCGCCGTA CCCATTGGCA GTGGCAAACC GCAGCGGGCA TCGAGCAAGT GCCTGTGGGG
GATTTTGCCT TTTATGATCA AGTGCTGACC TTAAGTGCGA CCTTAAATGC CATTCCTGAT
CGCCACCGCG GCGAAGGTGC TATCGATCTC GATACTCTAT TCCGTGTTGC CCGCGGCAGA
GCGCCAACGG GCCAAGATGC GCCAGCTTCT GAAATGACCA AGTATTTTAA TACTAACTAT
CACTATCTGG TGCCTGAGCT GACGCAAAAC CAAGAGTTTT CGATTGCTTA CGAGCAGTTT
TTTGATGAAG TCAGCGAAGC GCAAGCGCTA GGCTATAAAG CCAAACCTGT GCTACTCGGT
CCAGTCAGTT ACTTATACCT TGCTAAAACC GTCGGCCAAG AGTTCGATAA GTTAAGTTTA
TTACCGAATT TATTAACGGC TTATGCTGAC ATTCTGGCGC GTTTCGCCGC CCAAGGTGTG
GAATGGGTAC AGTTAGATGA GCCTGTGCTG GCATTAGAAT TAGACCTGCA TTGGCAAGCG
GCGATGACTA AGACTTATCA AGCATTAAGC ACTGCTAACG TTAAGGTTCT CTTAGCGAGT
TATTATGGCG GTATTGCGCA TCATCAAGCC CTAGTATCTG CCTTGCCTGT TGCTGGTTTG
CACTTAGATT TAGTTACTGC GCCAGAACAA CTGGCTGTGT TTGCGAATGC CCTTGGTCAA
GATCAAATGT TATCGGCAGG TGTGGTTAAT GGCCGTAACG TGTGGGCGGC AGAAATCGAT
TTGATTGCCG AGCGTATTGG CGCTGTGGCG CGTGATTTAG GCGATCGTTT GTGGATTGGC
ACATCATGTT CATTGCTGCA TAGCCCAGTC GATTTAGATG TTGAAGTCAA ACTATTACCT
GTACTGCGTA AGCAGTTGGC CTTTGCTAAG CAGAAACTGT TGGAATTGAG CAAAGTTCGC
CAATTATTGT TAGCGCCTAG TTCGGATGAA GCACAGAAAA TCAGTGCTTT TTGTATCGCT
CGTCGCCAAG CAAAAGCGCA GGCTGCAGAT AAGCAAGTAG TTGATCGCGT TGCGGCATTA
ACCGCTGCAG ATTATGAGCG TGCCAATGAT TTCAGTGTGC GCCAAAGCGT GCAGCAGCAA
AAATACCATT TACCTCTGTT ACCCACCACG ACCATAGGTT CGTTCCCACA AACACCGGCA
ATCCGCGGAC TACGCAGCCG CTGGCGCAAG GGTGAGCTTA ACGATGCTCA GTATAATGAG
CAGTTACAGC AAGTGACCCG CGATACTATC GAACGCCAAC TAAAACTGGG TATCGACGTA
CTCGTGCACG GTGAAGCCGA ACGTAACGAC ATGGTGGAGT ACTTCGGCGA GCAGTTAGCC
GGCGTTGGTT TTAGTAAAAA TGGCTGGGTG CAAAGCTATG GCTCACGTTG TGTTAAGCCA
CCCTTGATTT ACGGCGATGT GAGTCGTCCA AAAGACATGA CAGTCGAGTG GGCTGAGTTT
GCCCAGAGTC TCACCGACAA GCCCGTAAAA GGCATGTTGA CGGGGCCAGT GACGATTTTG
CACTGGTCAT TCGCCCGTGA AGATATCAGC CGCGATGCGA TTGCGACACA ACTGGCGCTG
GCTATTCGTG ATGAAGTGGT CGATTTACAA AATGCGGGGA TTGGCATTAT TCAAATTGAT
GAGCCCGCCT TCCGTGAAGG TCTGCCATTG AAACAAAGTG AGTGGCAAGC CTATTTAGAT
TGGGCGGTGA ATGCCTTTAA ACTCAGCGCT GCTGGCGTGA CTGATGAGAC TCAAATCCAC
ACTCACATGT GTTACAGCGA GTTTAACGAC ACGATTGGCG CGATTGCTGC CATGGATGCC
GATGTGATCA CTATCGAGAC TTCGCGTTCA CGGATGGAGT TACTCAACGC CTTTGAAGAT
TTTGAATATC CAAATGAAAT CGGCCCTGGA GTGTACGATA TTCATTCACC AAATACTCCA
AGTGTGGAGG CCATGGTGCA CTTAATTGAG AAAGCCGCGC AGAAAGTACC CGTGCGTCAA
CTGTGGGTCA ACCCAGATTG TGGCCTAAAA ACCCGCACCT GGGATGAAGT CGAACCTGCA
TTGAAAAACA TGGTCGATGC TACCCGCGAA CTGCGTCGCC GCCTTGGCTA A
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| Protein sequence | MQLNSLGFPR IGRRRELKFA LEKYWRGEIT QAELREVASE LRRTHWQWQT AAGIEQVPVG
DFAFYDQVLT LSATLNAIPD RHRGEGAIDL DTLFRVARGR APTGQDAPAS EMTKYFNTNY
HYLVPELTQN QEFSIAYEQF FDEVSEAQAL GYKAKPVLLG PVSYLYLAKT VGQEFDKLSL
LPNLLTAYAD ILARFAAQGV EWVQLDEPVL ALELDLHWQA AMTKTYQALS TANVKVLLAS
YYGGIAHHQA LVSALPVAGL HLDLVTAPEQ LAVFANALGQ DQMLSAGVVN GRNVWAAEID
LIAERIGAVA RDLGDRLWIG TSCSLLHSPV DLDVEVKLLP VLRKQLAFAK QKLLELSKVR
QLLLAPSSDE AQKISAFCIA RRQAKAQAAD KQVVDRVAAL TAADYERAND FSVRQSVQQQ
KYHLPLLPTT TIGSFPQTPA IRGLRSRWRK GELNDAQYNE QLQQVTRDTI ERQLKLGIDV
LVHGEAERND MVEYFGEQLA GVGFSKNGWV QSYGSRCVKP PLIYGDVSRP KDMTVEWAEF
AQSLTDKPVK GMLTGPVTIL HWSFAREDIS RDAIATQLAL AIRDEVVDLQ NAGIGIIQID
EPAFREGLPL KQSEWQAYLD WAVNAFKLSA AGVTDETQIH THMCYSEFND TIGAIAAMDA
DVITIETSRS RMELLNAFED FEYPNEIGPG VYDIHSPNTP SVEAMVHLIE KAAQKVPVRQ
LWVNPDCGLK TRTWDEVEPA LKNMVDATRE LRRRLG
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