| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3633 |
|---|
| Symbol | |
|---|
| ID | 5369650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 4313799 |
|---|
| End bp | 4314269 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640831891 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001367821 |
|---|
| Protein GI | 153002140 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4807] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.059519 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGA TTAATAATGA TATTTTGCGC CGTTTGCGCT TCGTGTTTGA TTTCAACAAT
GCCAAAATGA TTAAAATTTT TGCCAAAGCT GGAAGAGAAG TGCCGACAGA AGAGATCATT
GCTCTACTGC ACAAAGAAGA GGAAGAAGGT TACAAAGCCT GTAATGACAC CACTTTATGT
CAGTTCCTAG ACGGCCTTAT CATCGAAAAG CGTGGCCTAC GTGAAGGTGC AGAAATCCCA
GCGCCAGTAT CGCGTTTAAA CAATAACTTA ATCTTCAAAA AGCTCAGAGT TGCCCTCGAA
ATGCGTGAAG AAGACATAGT TGCAGCCTTA GCTCTAGCCG AAGTGCAAAT GTCAAAATCA
GAACTGAGCG CGCTGTTCCG CAATCCGGAT CATAAGAATT TTAAAGAGTG TGGCGATCAA
ATCCTGCGTA ACTTTATTCG CGGCTTATCA CTTAAGTATC GCGGTGAATA A
|
|---|
| Protein sequence | MTMINNDILR RLRFVFDFNN AKMIKIFAKA GREVPTEEII ALLHKEEEEG YKACNDTTLC
QFLDGLIIEK RGLREGAEIP APVSRLNNNL IFKKLRVALE MREEDIVAAL ALAEVQMSKS
ELSALFRNPD HKNFKECGDQ ILRNFIRGLS LKYRGE
|
|---|
| |