| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3632 |
|---|
| Symbol | |
|---|
| ID | 5369649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 4312380 |
|---|
| End bp | 4313654 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640831890 |
|---|
| Product | putative manganese transporter |
|---|
| Protein accession | YP_001367820 |
|---|
| Protein GI | 153002139 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.162179 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAT CCTCGACAAC CTCCCCTTCA TCCTCTTGGA TGGCACACCT GACGCTTGGC
ATTAAAGCTA TGGGGCCCGG TGTGCTTATG GCCGCAGCGG CGATTGGCGC ATCGCATTTA
GTCGCCTCGA CTCGAGCGGG CGCCGAATTT GGCTGGCAAC TGGCTTGGGT CATTTTAGGG
GTGAATTTAC TTAAGTATCC CTTCTTTGCC GCTGGTGCAC ACTACACCGC CGCCACAGGG
GAAAGTTTAC TGCACGGTTA CCTCAAACAG GGCCGAGGTT ATTTGCTGCT GTTTACTGGA
CTGAATGTGA TTGCCGCCGT CGCGAGCACT GCGGGTGTTT GCATGCTCAC CGCCGCTATG
TTGACCCAAT TTATTCCGCT TCCCATCGAT TGGTTAGCCC TGCTGGTATT GCTGAGCTCA
TTGGCTTTGC TGATCTTAGG TCATTATCAA CTACTCGATA GACTCACTAA GATCATCATG
TTCGCCTTAA CGCTAACGAC CTTAATTGCC GTGGCCTTAG CTTGGGATCA TGCTCAGCCA
TTAGCAAGCA ATTTTGTCTC TCCCTCACCT TGGCAATGGG CCCATGTGGG ATTTTTGGTC
GCCATGATGG GCTGGATGCC GGCACCAATT GAAGTGAGCG CTTGGAACTC ACTCTGGTTG
CTCGAAAAAC AAAAAAGCCA GACGGTCACA AAAGCGCAGG CGCTGCTCGA CTTTAACTTA
GGCTACATCA TCACCGCGAT CCTCGCGATC GTGTTTCTGT CCTTGGGCGC CTTAGTGATG
CACGGCAGTG GTGAGCACTT TTCTGATTCA GGCGCACAAT TTGCTAATCA ATTGATCAAC
CTTTACAGCC AAGTGATGGG TGGTGAAAGT CGTTATCTTA TTGGGATTGT GGCTTTTCTC
TGTATTTTTA GCACCACAGT AACCGTTATC GATGGCTACA GCCGCACCTT AGATATGGGC
TGGCAATTAC TCACCTCAAA GGCCAGTTCA GACAAACGCC TCACAGGGAT CATGCTCGCC
ATCAGTGCCT TTGGCTTATT GCTGATCCTC TTCTTTAAAG GCGCACTGTT GCCGCTACTT
GAGTTTGTGA TGATTTTGGC CTTTATGACC ACAGTCATTT TTGCTTGGTT GAACTACCGC
TTAATGACCA GCAAACAGCT CCCCGAAGCC GATAGGTATG GCACTAAGAT GAAACTACTC
TCTTGGTTTG GCCTGAGTTA TCTGCTGATT TTCGCGGCAC TGTTTATCTA TTGGTACAAC
GTCATTAAAG GTTGA
|
|---|
| Protein sequence | MTESSTTSPS SSWMAHLTLG IKAMGPGVLM AAAAIGASHL VASTRAGAEF GWQLAWVILG
VNLLKYPFFA AGAHYTAATG ESLLHGYLKQ GRGYLLLFTG LNVIAAVAST AGVCMLTAAM
LTQFIPLPID WLALLVLLSS LALLILGHYQ LLDRLTKIIM FALTLTTLIA VALAWDHAQP
LASNFVSPSP WQWAHVGFLV AMMGWMPAPI EVSAWNSLWL LEKQKSQTVT KAQALLDFNL
GYIITAILAI VFLSLGALVM HGSGEHFSDS GAQFANQLIN LYSQVMGGES RYLIGIVAFL
CIFSTTVTVI DGYSRTLDMG WQLLTSKASS DKRLTGIMLA ISAFGLLLIL FFKGALLPLL
EFVMILAFMT TVIFAWLNYR LMTSKQLPEA DRYGTKMKLL SWFGLSYLLI FAALFIYWYN
VIKG
|
|---|
| |