| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3623 |
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| Symbol | |
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| ID | 5370485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4302091 |
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| End bp | 4302831 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640831881 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001367811 |
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| Protein GI | 153002130 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTCGGCC TCATAATATG GCAGTTTTCT TTATTGAAGT TGAGTATTAA CGTGCGTTTA
GACAAATTTA TCTGTGAGAG TACCCCACTG ACTCGCTCAT TAGCGAAAAA AGCCCTGCAT
CGCGGTGACA TCACTTGCGA TGGCATAGTC GTCAAAGACT CGGGCTTTAA AGTGACTGAA
GGTATGCGTG TTTGTCTCGA GGGCGAGCCT ATTGCCTTAG TGGGCGTACG TTATTTAATG
CTCAACAAAC CAGTCGATAC GATTTGTTCA ACGATTGATG AAACCTATCC ATCGGTATTG
AGCTTAGTGG ATGTGCCAAA GCCTGAAACC TTGCACATTG CCGGCCGTTT AGATGCCGAT
ACCACAGGGC TAGTGCTGAT CACTACCGAC GGCCAGTGGT CGCATAAAAT TACTTCACCG
AAGAAAGAAT GCGGTAAACG CTATTTAGTG CAACTCGCCG ATCCTGTGGA TGCCGGCTTG
ATTGCAGTAT TTGCCGCTGG TGTTGAATTG CGCGGTGAAG ATGGCTTAAC TAAGCCTGCA
TTGCTGGAGA TTATTGAGCC GCAATTAGTG CGACTCACCA TCACTGAAGG TAAGTACCAT
CAAGTGAAAC GTATGTTTGC TGCGGTGGGC AACCACGTGC AAGGATTGCA CCGTGAAAGT
GTCGGCCAAA TTGAATTAGA TCCCGCCTTA GCGCTGGGTG AATGGCGTTA TTTGACCGCC
GAAGAAATAG CATCAGTTTA A
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| Protein sequence | MVGLIIWQFS LLKLSINVRL DKFICESTPL TRSLAKKALH RGDITCDGIV VKDSGFKVTE
GMRVCLEGEP IALVGVRYLM LNKPVDTICS TIDETYPSVL SLVDVPKPET LHIAGRLDAD
TTGLVLITTD GQWSHKITSP KKECGKRYLV QLADPVDAGL IAVFAAGVEL RGEDGLTKPA
LLEIIEPQLV RLTITEGKYH QVKRMFAAVG NHVQGLHRES VGQIELDPAL ALGEWRYLTA
EEIASV
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