| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3614 |
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| Symbol | prfA |
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| ID | 5371128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4292282 |
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| End bp | 4293373 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640831872 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_001367802 |
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| Protein GI | 153002121 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000815596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGAAT CCGTTATCCG CAAGCTGGAA GGCTTGCTCG AGCGCAATGA AGAAGTCATG
GCTTTGCTGG GTGATGCTAG CGTCATTTCG GATCAAGACA GGTTTCGCGC GTTATCGAAA
GAATATGCCC AGTTAGAAGA CGTTGTTGCT GGCTTTAAAG CCTATCAGCA AGCGCAGGCT
GATCTTGATT CTGCCAAAGA AATGCTGGAA GAAGACGATG CAGAAATGCG CGAAATGGCG
CAGGAAGAGA TGAAAGCCGC TAAGGCCAAA CTCGAGCATC TTGAAGATGA ACTGCAAATT
CTTTTACTGC CAAAAGATCC CGACGACGAT AAAAACGCCT TCGTTGAGAT CCGCGCAGGT
GCAGGCGGTG ATGAAGCCGC GATTTTCGCG GGCGATTTGT TCCGCATGTA CAGCCGTTAT
GCCGAAGCAA ATCGCTGGCA GATCGAAATT ATGAGCTGTA ACGAAGGCGA ACATGGTGGC
TTTAAAGAAG TGATCATGAA GGTGAGCGGT GAAGGCGTAT ACGGCAAACT TAAGTTTGAA
TCCGGCGGTC ACCGCGTACA ACGTGTGCCA GAAACCGAAT CCCAAGGTCG TGTGCATACT
TCTGCGGTGA CTGTGGTTGT ACTGCATGAA GTGCCTGAAG CGGAAGCGAT TTCAATCAAT
CCTGCCGATC TGAAAGTTGA TACTTTCCGT TCATCGGGCG CGGGTGGTCA GCACGTTAAC
AAAACTGATT CTGCCATTCG TATTACCCAC ATTCCAACAG GGATAGTGGT GGAATGCCAA
GATCAACGCT CGCAACATAA GAACCGTGCC CAAGCCATGA GTGTTCTGGC CGCACGTATT
CAAGCTGTTG AAGACGAAAA ACGCCGTAGC GCCGAAGAAT CGACCCGTCG TAGTCTGGTT
GCCAGTGGTG ATCGCTCCGA ACGTGTACGT ACTTACAACT TCCCGCAAGG CCGAGTGAGC
GAACACCGCA TCAACTTGAC TTTATATCGC TTGAACGAAG TGATGGAAGG CGATCTCGAT
GCCATTTTAT TGCCTCTGAT GCAAGAGCAT CAAGCCGATC AGTTAGCCGC ACTGGCTGAC
GAGCAGGGGT AG
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| Protein sequence | MKESVIRKLE GLLERNEEVM ALLGDASVIS DQDRFRALSK EYAQLEDVVA GFKAYQQAQA
DLDSAKEMLE EDDAEMREMA QEEMKAAKAK LEHLEDELQI LLLPKDPDDD KNAFVEIRAG
AGGDEAAIFA GDLFRMYSRY AEANRWQIEI MSCNEGEHGG FKEVIMKVSG EGVYGKLKFE
SGGHRVQRVP ETESQGRVHT SAVTVVVLHE VPEAEAISIN PADLKVDTFR SSGAGGQHVN
KTDSAIRITH IPTGIVVECQ DQRSQHKNRA QAMSVLAARI QAVEDEKRRS AEESTRRSLV
ASGDRSERVR TYNFPQGRVS EHRINLTLYR LNEVMEGDLD AILLPLMQEH QADQLAALAD
EQG
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