| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3609 |
|---|
| Symbol | |
|---|
| ID | 5371407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 4288178 |
|---|
| End bp | 4289425 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640831867 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001367797 |
|---|
| Protein GI | 153002116 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5505] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGCA CGGCTTTAGT GACGAACGAT GCCACGGCGT TAGGGATACT CGCGACAATT
CTAGGTTTTG TATTTTATAC CAGTAGCAGT AGTCATCCTT TTTGGCAGAA GTTTTATCGT
TTCATTCCCG CCCTTTTATT GTGTTATTTC TTGCCCTCTT TATTGAATAC CTTTGGGGTG
ATCGACGGTA ATACCTCACA ACTGTATTTT GTGGCGTCAC GTTATTTACT GCCAGCGTGT
TTAGTCTTAT TAATTTTAAG CGTTGATTTA AAAGCTATTT TAAGTTTAGG GCCGAAAGCC
TTAATCATGT TTTTAACCGG CACTGTCGGT ATCGTCATCG GTGGCCCGAT TGCCTTGCTG
TTAGTGTCGA TCATCGAGCC CTCTTTAATT GGAGTTGATG GTCCTGATGC GGTATGGCGC
GGCATGACGA CCTTAGCCGG AAGCTGGATT GGTGGCGGCG CAAACCAAGC CGCGATGAAA
GAAATCTATG CGGTAGGTGG CAATATTTTC TCTGTGATGG TGACAGTCGA TGTGATTGTC
GCCAATATCT GGATGGCCGT ATTGTTATTT ATGGCCTCAA AGGCGAAAGA GATTGATGCG
AGAACGGGTG CCGATACCTC AGCAATCGAA GCGTTAAAAG ATAAAGTAGA AAAGTATCAC
GCTGAAAATG CCCGCATTCC TAATCTGCGC GATCTTATGC TGATTGTCGC CGTTGGCTTT
GGTATCACAG GTATTGCCCA TATGGCCGCC GATTTCCTTG GGCCATTTTT TGAAGCGAAC
TACCCTTGGA CCGAAGATTA CAGTTTAACC TCTAAGTTCT TCTGGTTAGT GGTGATAGTC
ACAACCATTG GTTTGGCTAT GTCCTTCAGC CCTGTGCGCC ATTTAGAGGC GGCGGGGGCA
TCAAAAGTGG CGTCGGCCTT CCTTTACATC TTAGTGGCGA CGATTGGTCT GCACATGGAT
GTGAGTAAAG TGCTCGACAC GCCTCTGTAC TTTTTAGTGG GCATTATTTG GATGTTAGTG
CACGCCGGCT TTATGTTATT GGTGGCTAAG TTGATTAAAG CCCCGCTGTT TTACATGGCC
GTGGGTAGCC AAGCGAACGT CGGCGGTGCA GCATCTGCCC CTGTCGTTGC TGCGGCATTC
CACCCCGCTT TAGCGCCTGT TGGCGTGCTG TTAGCCGTAT TTGGTTATGC GTTAGGGACT
TACATGGCGT GGCTCTGTGG CCAGCTTTTA CAAGCAGTTG CGGCATAA
|
|---|
| Protein sequence | MTSTALVTND ATALGILATI LGFVFYTSSS SHPFWQKFYR FIPALLLCYF LPSLLNTFGV
IDGNTSQLYF VASRYLLPAC LVLLILSVDL KAILSLGPKA LIMFLTGTVG IVIGGPIALL
LVSIIEPSLI GVDGPDAVWR GMTTLAGSWI GGGANQAAMK EIYAVGGNIF SVMVTVDVIV
ANIWMAVLLF MASKAKEIDA RTGADTSAIE ALKDKVEKYH AENARIPNLR DLMLIVAVGF
GITGIAHMAA DFLGPFFEAN YPWTEDYSLT SKFFWLVVIV TTIGLAMSFS PVRHLEAAGA
SKVASAFLYI LVATIGLHMD VSKVLDTPLY FLVGIIWMLV HAGFMLLVAK LIKAPLFYMA
VGSQANVGGA ASAPVVAAAF HPALAPVGVL LAVFGYALGT YMAWLCGQLL QAVAA
|
|---|
| |