| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3588 |
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| Symbol | |
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| ID | 5372922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4268017 |
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| End bp | 4268787 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640831846 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001367776 |
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| Protein GI | 153002095 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0782802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGC TCTACTTTAT CGCCTTTAAA AGCATCTTAA GCAAAGAAAT TAATCGGTTT
ACGCGAATTT GGATCCAGAC TTTAGTGCCG CCTGCGATTA CCATGACCTT GTATTTTTTG
ATTTTTGGTA ACTTAGTCGG CAGCCGCATT GGAGAGATGG GCGGCGTATC TTATATGGAG
TTTATTGCCC CAGGTTTGAT CATGATGTCG GTGATCACTA ACTCTTACTC GAACGTGGCG
AGCTCATTCT ACAGTGCTAA GTTTCAGCGC AATTTAGAAG AGCTAATGGT GGCACCTGTG
CCCCATTATG TGTTGATTGC AGGCTATGTT GGTGGCGGCG TGGCGCGCGG TTTATGTGTC
GGCCTAATAG TGACGCTTGT GGCCATGTTC TTCGTCGACA TTAGCTTGCA TCATGCCGGT
TTAGTGGTAA TGACAGTGTT TTTAACCTCA GTGTTATTCT CACTGGGTGG CTTGATTAAC
GCTGTTTTTG CAAAGAGTTT TGATGATATC AGTATCATCC CGACCTTTGT GCTCACCCCA
TTAACTTACC TTGGCGGGGT ATTTTATTCC CTGTCACTCT TGCCCCCTTT CTGGCAAGGC
GTGTCGGCAC TCAACCCTGT GGTTTATATG ATCAACGTGT TCCGCTATGG CTTTTTAGGC
TTCGCCGACA TCAGTGTGCC ATTGTCCATC GCCATAATGA TCGGTTTCTG TGTCGCTCTG
TGGACCTTAG CGTATTACTT AGTCTCGCGC GGAATAGGGT TACGTTCGTA A
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| Protein sequence | MNQLYFIAFK SILSKEINRF TRIWIQTLVP PAITMTLYFL IFGNLVGSRI GEMGGVSYME
FIAPGLIMMS VITNSYSNVA SSFYSAKFQR NLEELMVAPV PHYVLIAGYV GGGVARGLCV
GLIVTLVAMF FVDISLHHAG LVVMTVFLTS VLFSLGGLIN AVFAKSFDDI SIIPTFVLTP
LTYLGGVFYS LSLLPPFWQG VSALNPVVYM INVFRYGFLG FADISVPLSI AIMIGFCVAL
WTLAYYLVSR GIGLRS
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