| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3575 |
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| Symbol | |
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| ID | 5373281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4250824 |
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| End bp | 4252161 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640831834 |
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| Product | SufS subfamily cysteine desulfurase |
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| Protein accession | YP_001367764 |
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| Protein GI | 153002083 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAC CTGCATCGCC TACGCCAAAT ACTGTGACTC ACACAGCGAC GAATACTGTT
GCCTCACATC CTTCGGCAAG TGCCGCGCCT GATGCCACTG CTGTTCTTTG TTCATTAGAA
GCGGAGCAGC GCAATGCTAA AATTAGGTCG CAATTCCCAG CGTTACATCA ACTGCTTGAT
GGCTATCCCT TGTGTTATCT CGACACAGCA GCCACCAGCC AGAAACCGCA AATGGTGTTA
GATGCCATGG CGCAGTTTTA CGCTAACGAC AATGCCAATG TGCACCGCGC GGCGCACCAG
TTATCGGCGC GATCGACCTT AAGTTATGAA AAAGTGCGCG ATCAACTGCA GCTATTTTTA
AAGGCCGAAC GCCGCGAAGA AATCATCTTT ACCCACGGCA CCACAGAATC AATAAACTTA
GTCGCCTTTG GACTCTCTGC ACACGTCAAC GCTGGTGATG TGATATTAAT CGACGCCGCC
GCCCACCACG CCAATATCGT ACCTTGGCAG GAGCTGGCAA AACGCACGGG CGCTGTGATT
AAGCCAATCC CTCTCGATCA AGCTTGCCGC TTAGATGTCA GCGCCTATAA AACCTTGCTC
GAGTTAAAGC CAAAAATCGT CGCGCTTTGC CATGTTTCCA ACGCCCTAGG CACAGTCAAT
CCCGTGGCTC AGTTAGTTCA GTTAGCAAAA GTCCAAGGTG TAATAACCTT AGTTGATGGT
GCGCAGGCAG TGGCGCACTT AACGTTGGAT GTGACTGAAA TTGATTGTGA TTTTTACGTT
TTCTCGGGGC ATAAAATGTA TGGTCCCACT GGCGTTGGCG TGCTTTACGG CCGTTTCGAC
GTGTTAGATA ATCTCGCGCC ACTATTAACT GGCGGCGAGA TGATTAAACG CGTGAGCTTT
GAGGTAACAG AATTTGGCAG CCTACCGAAT CGCTTAGAAG CGGGCACGCC ACCAATTGCC
GAAGTTATAG GTTTAGGCGC GGCCATTACA TTTTTACAAA CCGAGCTTAC ACCGCAGGTT
CAAGCTTATG AAGCTGAATT AGTTAACTAT TTACAAAGCC AATTGCGCGC GCTCGGTGAA
GTGCATTTAT ACGGCGCCTT TGATGACAAT ATCGGCGTCG TCGCCTTTAA TCTTGCCGAT
GAACATCATC AAGATGTGGG CATTTTACTG GATCAACAAG GAATTGCCGT GCGCTGCGGC
CATCACTGCG CCATGCCATT AATGCAGAGC CTGAATCTTA AGGGCTGTTG CCGCGCCTCT
ATCGGTATCT ACACCAATAA AGACGACATC GACCGCTTTA TTGCTGCGTT GGCCTCGGTA
AAAGACTTGC TGCTGTGA
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| Protein sequence | MTQPASPTPN TVTHTATNTV ASHPSASAAP DATAVLCSLE AEQRNAKIRS QFPALHQLLD
GYPLCYLDTA ATSQKPQMVL DAMAQFYAND NANVHRAAHQ LSARSTLSYE KVRDQLQLFL
KAERREEIIF THGTTESINL VAFGLSAHVN AGDVILIDAA AHHANIVPWQ ELAKRTGAVI
KPIPLDQACR LDVSAYKTLL ELKPKIVALC HVSNALGTVN PVAQLVQLAK VQGVITLVDG
AQAVAHLTLD VTEIDCDFYV FSGHKMYGPT GVGVLYGRFD VLDNLAPLLT GGEMIKRVSF
EVTEFGSLPN RLEAGTPPIA EVIGLGAAIT FLQTELTPQV QAYEAELVNY LQSQLRALGE
VHLYGAFDDN IGVVAFNLAD EHHQDVGILL DQQGIAVRCG HHCAMPLMQS LNLKGCCRAS
IGIYTNKDDI DRFIAALASV KDLLL
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