| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3573 |
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| Symbol | |
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| ID | 5373279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4246429 |
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| End bp | 4248705 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640831832 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001367762 |
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| Protein GI | 153002081 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTG CACTATCTTC AATAGCGCTA GCAGTGGCTG GCGTGTGTTC ACCGGTTATG
GCCGCTCAAT TACAAGGTCA AGTGACCGAT CTGCAAGGCA CACCTATCGC TGGCGTCCTT
GTCAGTATCG ACGGTGGGAC GAGTACAAGC ACAAATCCTC AGGGCCAGTA TCAGTTAACT
GTCGCCGACA ATAGTCATAT CCATCTCCAC ATTAGCTATG CCGAGTTTAA GCATGTTGAT
AGGGATTTGC AGATAACCAC TGGCGCGGTA ACGCAGGATA TTTCACTGAC AAAAACGGCG
ATGGAAAACA TTGTCGTGAC CGCATCGCCG CTCGCCCGCT CTGCGCTCGA AAGCACGACG
CCAATCAGTG TGTTAACCGA AGATCAACTC AAGCTCAATA TCGAGCCGAC GCTAGGTGAC
ACCTTAGAAA AATTGCCCGG CGTTCAAGCC TCCCACTTTG GCGCGGGGGC GAGTCGCCCC
ATCATTCGCG GCATGGGCGG TCCTCGAGTA CAAGTGCTTG AAGATGGCCT GTCTGTTGGT
GATGCATCGA CGGTATCGGC CGATCACGCG GTAACAGCAG AAGCCGCCTC GGCGCAGCAA
ATTGAGATCC TGCGCGGCCC AGGCACATTG CTTTACGGGA ACGGCGCCAT TGGCGGCGTG
GTCAATGTGG TTGATAAACG CTACCACGAG AGCCCAGTCG ATGAGTTATC GGGACAATTT
GGCACTCGCT ACGACACAGC CAGCAATGGC CGCACCTTTA ACGGTGATAT CGATGGCGGC
AATGGTCAGT TCAATTGGCA TGTAGATGGC ACCCACCGCA TTACCGACGA TGTCGATATT
CCGGGAAATG CCATTGCCAA TCTGCCCGAA ACCCATGGAA AACTGGCGAA CAGTAACCAA
AAACTCAACG ACTATGCCGC GGGTGTTGGT TATACCGGTG ACACGGGATT TGTCAGCGTA
TCCGGCGCGC GCACTGAATC GAATTACGGT ATTCCCGGCC GCGGCGAAGC CGATGCGCCC
GATATCACCA TAGATTTAAA GAAAACCGCA TGGCAGCTGC ACAGTGGTTT GTTAGATCCA
TTTGCTGGCT TCAGTAAACT GCGTTTTGAT GCTGGCTATA CCGATTATCA ACATGCTGAG
GAAGAAGATG GGGTTGCCGG CACGACTTTC TTTAACAAGC AAAGTGAAGC GCGCTTAAGC
CTTAACAATC GTCCTTGGGG TGAGTGGCAA GGCACTATGG GGCTGCATGC TGTACACCGT
GATTTTGCCG TTGAAGGTGA AGAAGCGCTG ACACCAGACA GCAAAACCGA TACCTTAGCC
GCCTTTATCG TGCAAGAACG TAAGGTCGGA GATTTTCGCT TCGAGCTTGG CGGCCGCTTA
GAGCATTACC GCTTAGCGCC AGACAGCATG ACGTTAGACA CACTAAATGG CGAACAAACC
TACCAAGCCG AAGACCTAGT CGATAATGAT TTAACTGTAT CGGCGGGCAT GGTGTGGGAC
TTCGATCCCG CCTATAACTT AGGACTGTCG CTCACCCGCG CCCAACGTTC GGCCACCGCC
GAAGAGCTTT ACAGCTATGG TCCCCACGAT GCCACCCAAA GCTTTGAGCT TGGTTCGCAG
TTCAGCGTTG AAAATGGTCA AATCATCACT AACAGTGGCA ATAACGATAA AGAGGTCGCC
AATAATATCG ACTTAACCCT GCGCAAATTA GAGGGTGCGT GGACAGGCTC ATTGAGCATG
GCCTACAACC GAGTCAATAA TTTCTATTAC GAGAAAAATA CGGGCTTAAT CGCCTCTGAT
ATAGTCAACG GCGATGCTGA AGGTGATTTA CCGGTTTACC AATACACCCA AGGCGATGCC
GAGCTTTATT CCCTCGAGGC CCAAGCCAGT ATCCCGTTCA ACGATACTTG GTCATTGGAT
ATGTTCAGCG ATTACACCCG CGGCAAGTTG GTCGATGGTG GTAACTTGCC ACTCATTTCG
CCCATGCGTA TCGGTTCAAC TTTAAACTTT GACCAACAAC AATGGCACGC TGAAGTCGGC
GCAATTGGCT ATGCTAAACA AACGGATACC GCCGAAAATG AAACCGAAAC AGCAGGCTAT
GCGCTAGTGA ATGCCGCCGT CACCTACCGT TTATATACTT CTGCGGGTGA CATGCTGTTC
TATGTCAAAG GCACAAATCT ACTCGACCAA GACGCGCGGC CACACACCTC GTTACTCAAA
GATTACGCCC CACTGATGGG ACGCAACTTT ATGTTAGGTG TCACCTATAA CTTCTAA
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| Protein sequence | MKLALSSIAL AVAGVCSPVM AAQLQGQVTD LQGTPIAGVL VSIDGGTSTS TNPQGQYQLT
VADNSHIHLH ISYAEFKHVD RDLQITTGAV TQDISLTKTA MENIVVTASP LARSALESTT
PISVLTEDQL KLNIEPTLGD TLEKLPGVQA SHFGAGASRP IIRGMGGPRV QVLEDGLSVG
DASTVSADHA VTAEAASAQQ IEILRGPGTL LYGNGAIGGV VNVVDKRYHE SPVDELSGQF
GTRYDTASNG RTFNGDIDGG NGQFNWHVDG THRITDDVDI PGNAIANLPE THGKLANSNQ
KLNDYAAGVG YTGDTGFVSV SGARTESNYG IPGRGEADAP DITIDLKKTA WQLHSGLLDP
FAGFSKLRFD AGYTDYQHAE EEDGVAGTTF FNKQSEARLS LNNRPWGEWQ GTMGLHAVHR
DFAVEGEEAL TPDSKTDTLA AFIVQERKVG DFRFELGGRL EHYRLAPDSM TLDTLNGEQT
YQAEDLVDND LTVSAGMVWD FDPAYNLGLS LTRAQRSATA EELYSYGPHD ATQSFELGSQ
FSVENGQIIT NSGNNDKEVA NNIDLTLRKL EGAWTGSLSM AYNRVNNFYY EKNTGLIASD
IVNGDAEGDL PVYQYTQGDA ELYSLEAQAS IPFNDTWSLD MFSDYTRGKL VDGGNLPLIS
PMRIGSTLNF DQQQWHAEVG AIGYAKQTDT AENETETAGY ALVNAAVTYR LYTSAGDMLF
YVKGTNLLDQ DARPHTSLLK DYAPLMGRNF MLGVTYNF
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