| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3555 |
|---|
| Symbol | |
|---|
| ID | 5371255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 4228678 |
|---|
| End bp | 4229727 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640831815 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001367745 |
|---|
| Protein GI | 153002064 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1246] N-acetylglutamate synthase and related acetyltransferases
[COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCAAG CGCAGTTAAA GCCCGCTAAC TTAGTTGTGA CATGCAACCA AACCCATTCA
ACTATGGCTC ACACAGACGC ACCATCGACT CCAGATCCAG CTAAGCCTGT AATTCACGCT
AAGCAAACGG CGGAGTCAGG CTCATCCGCC CAACTCAGGC ACTTATCTCG CTATCTGGTG
AGGAATTTAG GCATGCTCAA CGCCGCCTTT GGAGATTTGC CCCTCTCGCC AGTGCAAGCC
CACGCCTTGT TTGAGATAGG CAAGCAGCCG CTGACCATCA AAGAGCTGGC CTGCAAACTC
AGCATAGATA AGTCCAATGC GAGCCGAGCC ATTAAGCATC TGATTGATAA AAATCTTGCC
CAGAGTCAAA TACACCCACG GGACAGTCGC TGTTTAGTCG TACAACTCAC GCCCGCGGGG
AAGAAGTTAC TCCTGAAATT AGATACTCAA CAAAATCAAT TATTTCAAGA GATCTTAGCC
CAACTAACTC CGGCACAAAC CTCACAAATT GAAGAGGCAC TCATGTTATA TAACCAAGCC
GTACATAACG CCAAACACCA AAGTGGCTGT CACATTCGCC AAGCCACAGC CCAAGATGAT
GCCGCGATTG CCAAAGTCAT CCGCGATGTC TCGGCCGAAT ACGGCTTAAC CGCGGATAAA
GGTTATAGCG TGGCCGACCC GACCTTAGAT TGCCTCAGCC AGATTTACTC CCAAGCGGGC
GCCAACTATT GGATTATTGA ATTAGAGGGG CGCATTCTAG GCGGCGCCGG TATTGCGCCT
TTAGCTAGCA ATGAGGGTGT TTGTGAACTA CAGAAAATGT ACTTTATGCC TGAAATCCGC
GGCAAAGGGC TCGCAACACG CGTAGCACTA ATTGCACTCG ATTTCGCCCG CGAAACGGGT
TATCAAAGCT GCTATTTAGA AACCACAGCC GCGTTAAATG AAGCCGTAAA ACTCTATGAG
AAATTGGGCT TTGTACATCT ATCCGCTCCC CTAGGCAACA CAGGCCACGA CGCCTGCGAA
ATGCCAATGC TGCTAGAGCT TAATCAATAG
|
|---|
| Protein sequence | MLQAQLKPAN LVVTCNQTHS TMAHTDAPST PDPAKPVIHA KQTAESGSSA QLRHLSRYLV
RNLGMLNAAF GDLPLSPVQA HALFEIGKQP LTIKELACKL SIDKSNASRA IKHLIDKNLA
QSQIHPRDSR CLVVQLTPAG KKLLLKLDTQ QNQLFQEILA QLTPAQTSQI EEALMLYNQA
VHNAKHQSGC HIRQATAQDD AAIAKVIRDV SAEYGLTADK GYSVADPTLD CLSQIYSQAG
ANYWIIELEG RILGGAGIAP LASNEGVCEL QKMYFMPEIR GKGLATRVAL IALDFARETG
YQSCYLETTA ALNEAVKLYE KLGFVHLSAP LGNTGHDACE MPMLLELNQ
|
|---|
| |