Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3549 |
Symbol | |
ID | 5372519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4220931 |
End bp | 4222265 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640831809 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_001367739 |
Protein GI | 153002058 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAC CTAAGTCGTC GGCATTAGGC CGTGTTTGGT CTCGCTGGAT GTCAGTGCCG CTGTGGCTGC AAATTGTTAT TGGTATGGTG CTAGGCATTA TTGTCGGCGT CATTTTTGGT GAGCAAGCCA CTTGCTTAAA ACCGCTGGGC ACCTTATTTG TCAATGCCAT AAAGATGCTG ATCGTGCCAC TGGTTTTTTG CTCGCTGATC GTGGGCGTTA CGTCGATGCA AGACACAGGC AAGATGGGGC GTATCGGCTT TAAATCCTTT GGGTTTTATC TGTTTACCAC GGCTATCGCG ATCAGTATCG GCCTGCTTGT TGGTTATGTA TTGCAGCCCG GCGCAGGCTT AGGATTAACG CTGGCAGAAG GCGCGACTCA AACCGCCAAA GCTGTACCTT CATTAGTCGA TACCTTGGTT GATATAGTGC CGACAAATCC GATTGCGGCC ATGGCAAGCG GGCAAATTTT GCAAGTCATC GTATTTGCTA TCGCCTTAGG CATCGCGTTA GTGCTGATTG GCGAGCATGG TAAACCTGCG ATTAAAGTGT TCGAAAGCCT CGCCGAAGCC ATGTATAAAC TGGCCGACAT GGTGATGAAG CTCGCGCCCT ACGGCGTCTT TGGGCTAATG GCTTGGGTGG CGGGGGAGTA TGGTATTGAT ATGCTTTGGC CCCTGATCAA AGTCATCATT GCTGTATACC TTGGTTGTAT TATCCACGTG CTGGGTTTCT ATAGTTTTTT ACTGCGCGGA TTTGCGAAGT TAAGTCCGCT GCAGTTTTTT AAAGGCATTA GCAATGCGAT GTTAGTGGCG TTTACCACGT CGAGCTCTGC GGGTACGCTC CCTGCAAGCA TGAAGTGCGC GAGTGAAAAC CTAGGCGTTC ATAAGAAGAT TTCTAGCTTC GTGTTACCGC TGGGCACTAC CATCAATATG GACGGCACTG CATTGTACCA AGGCGTTACT GTGCTGTTTG TGGCGCAGGC GTTTGGTATC GACCTGACTA TTGTCGATTA TCTCACCATT ATTTTAACTG CGACTTTGGC TTCTATTGGC ACTGCGGGTG TGCCCGGTGC GGGTTTAGTG ATGCTGACGT TAGTGCTGAC AACCGTAGGG CTGCCCTTAG AAGGGGTGGC ATTGATAGCG GGGATTGACC GTATTTTAGA TATGGTGCGC ACTGTGGTGA ACGTCTCCGG TGACTTAGTG GCGACGACTG TGATTGCAAA GTCTGAAGAT GAGCTGGATA TGGCGCATTA CAATGCCGAC ACGGAGCAAA GCGCCGTGCT AGCCGAGCAA AATATTGCCC TTGAAACGGC GGCTGAGAAT AGCGCCAAAG TCTAG
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Protein sequence | MTKPKSSALG RVWSRWMSVP LWLQIVIGMV LGIIVGVIFG EQATCLKPLG TLFVNAIKML IVPLVFCSLI VGVTSMQDTG KMGRIGFKSF GFYLFTTAIA ISIGLLVGYV LQPGAGLGLT LAEGATQTAK AVPSLVDTLV DIVPTNPIAA MASGQILQVI VFAIALGIAL VLIGEHGKPA IKVFESLAEA MYKLADMVMK LAPYGVFGLM AWVAGEYGID MLWPLIKVII AVYLGCIIHV LGFYSFLLRG FAKLSPLQFF KGISNAMLVA FTTSSSAGTL PASMKCASEN LGVHKKISSF VLPLGTTINM DGTALYQGVT VLFVAQAFGI DLTIVDYLTI ILTATLASIG TAGVPGAGLV MLTLVLTTVG LPLEGVALIA GIDRILDMVR TVVNVSGDLV ATTVIAKSED ELDMAHYNAD TEQSAVLAEQ NIALETAAEN SAKV
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