| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3546 |
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| Symbol | |
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| ID | 5372076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4218986 |
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| End bp | 4220002 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640831806 |
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| Product | putative diguanylate cyclase |
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| Protein accession | YP_001367736 |
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| Protein GI | 153002055 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCCCG AGACCATCAA TCCCAACCTG AGTTTACTTG ATAGCGACAA TCAGCAAGTG
AATCTCACTC GCTGGATGCA CCAATGTGAG CTAATCAACA GCTATTACAA CGCTAACACG
GTTTTTATAT TCCAAAAGAC CAGCGCCGGA TTTGAGATCA TTGTCAGTGC AATCACTGAA
ACACCACAAT TTACTGCGGG TACTTTGTAC CCCGCAGAAC TCGAACTTTT TCAACAGATA
CAAAACAGCC AACCCGACGG TTTATATCAA AACCTTGGCA GCTTTATGTT GGATGATTTA
CCACGGGATT TTGATGGCAT TCAGCACATT CTCTCGCGCC CAATCGCTTG GCCCGATGGC
AGCCAATTTG GCGCCCTGTG CGTACTCAAC CCACATATGG CAGAGCCGCT AGCCAATGCC
GCTATGCTCG AACCGTTTCA GATATTGCTG CAACAGGAAT TATCTCTGCT GTGCCAGAAC
CATCGCATTG AATCCCTTTC GATGCGCGAC CAAGAAACCG GCATGCTCAA TCATTATGGT
TTTTTGATGA TGGCGCCAAG ACAGCTCAAT TTAGGCCGCC GCTTTGGTGC CCATGCAGGC
ATCATCTTCT TTGAATTACT GAGCCCAGAT AACACGCCCA TCCCCCTCGA AGATAATCAC
CACAGGCTGT TAGGCAAATT GATCCAAGAT ACGATAAGGA CCGCCGACGT AGCCGCCCAC
TACAACACCA CTCAATTTGT GGTACTGGCC TTTGTCGATG GTGAGCGGGA TATTCAGCAT
ATTATGAAGC GGGTAGAAAA ACAGTTAGAA CAACAAAACC ACCAGCTTAA ACTCGATGCG
AATTACAGTT TCTTCACTCC AGAATCCAGC GCCAAACTCG CGCCCATGAT GGAACTTGCG
CGGGGTAAAC TCGATTCAAT GCAACCACCA AAGCCTGAGG TTGAAGACAC GCCAGTTAAG
CCCGCCATAG ACTCAAGCTT ATACGATAAC CCCGCCGCAG ATTCGGCAGC GCTTTAA
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| Protein sequence | MLPETINPNL SLLDSDNQQV NLTRWMHQCE LINSYYNANT VFIFQKTSAG FEIIVSAITE
TPQFTAGTLY PAELELFQQI QNSQPDGLYQ NLGSFMLDDL PRDFDGIQHI LSRPIAWPDG
SQFGALCVLN PHMAEPLANA AMLEPFQILL QQELSLLCQN HRIESLSMRD QETGMLNHYG
FLMMAPRQLN LGRRFGAHAG IIFFELLSPD NTPIPLEDNH HRLLGKLIQD TIRTADVAAH
YNTTQFVVLA FVDGERDIQH IMKRVEKQLE QQNHQLKLDA NYSFFTPESS AKLAPMMELA
RGKLDSMQPP KPEVEDTPVK PAIDSSLYDN PAADSAAL
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