Gene Shew185_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3536 
Symbol 
ID5373144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4206909 
End bp4207646 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content45% 
IMG OID640831796 
Producthypothetical protein 
Protein accessionYP_001367726 
Protein GI153002045 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3137] Putative salt-induced outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TACTGACCGC AGCACTATTA ATGACTGCAC CTTTTATGGC GACAGCAGGG 
GCCGATTTTG TAAAAGGCGA CAAGACATTC GCTGGTGAAG CTGAGTTAGG TGCCACCTTA
ACCACAGGTA ACACTGAAAC CTCATCATTT AAGGGACGTT TAAATCTTAA GCATGAGCTT
GGCGATTGGG AAAATCAGTA CTTACTAGAA GGTTTATACA AAGAAGATAC CGGTTCTGTC
ACCGCGAAAC GCTATTTAGC AGGCGCACAG GGTAACTACA AGATGACAGA CCGTAGCTAC
CTGTTTGCGA ATGCCAGTTA TGAAGTCGAC CCGTTTACCG GTTATGACTA CACTCTATCT
GGCGCAGCGG GTTATGGTCA TAGACTGTAT GACACCAGCA AGACCTTTTT AGATGTTGAA
GTGGGTCCCG GTTATATCTA TCAACGTCTC GATACTGAGC AAGCGCTTAT CGAAGGTTAT
GACACCAACG ACAGCGTTGT TGCCCACGGC GTGATCAACT TTGAAACTGA AATCACTGAG
ACCTCTAAAT TCCAACAGCG TTTCGTTGCC GATTACGGTG ACAAGTTAGA TGCCCGTTCT
GAAACCTCAT TAACTGCAAA TATTATCGGT GCATTGGCGA TGAAGTTTGC CATTATTGTG
CGTTACAACA GCGAGCCGCT TGATGATAAG AAAAGCACAG ATACCGAAAC CAATATGACC
TTGTTATATG CTTTCTAA
 
Protein sequence
MKKVLTAALL MTAPFMATAG ADFVKGDKTF AGEAELGATL TTGNTETSSF KGRLNLKHEL 
GDWENQYLLE GLYKEDTGSV TAKRYLAGAQ GNYKMTDRSY LFANASYEVD PFTGYDYTLS
GAAGYGHRLY DTSKTFLDVE VGPGYIYQRL DTEQALIEGY DTNDSVVAHG VINFETEITE
TSKFQQRFVA DYGDKLDARS ETSLTANIIG ALAMKFAIIV RYNSEPLDDK KSTDTETNMT
LLYAF