Gene Shew185_3530 details

Gene Information

• Locus tag: Shew185_3530
• ID: 5370765
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 4199129
• End bp: 4199836
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640831790
• Product: radical SAM domain-containing protein
• Protein accession: YP_001367720
• Protein GI: 153002039
• COG category: [R] General function prediction only
• COG ID: [COG0535] Predicted Fe-S oxidoreductases

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAGC ATCTGCATAA GCAACACCTT GATAACTCGC ACGTTGTCAC TACTGAAACC 
CTAGCGAACG GTCACATTAC AGATGAAGTT TGCACGAATG AAACCTGTGC GACCGAAACG 
CTAGTCTATG ATATTCGCCG CAGTCGCTAC CTCAATATCA CAGGTCGCTG CACCCTGCGC 
TGCGCTTTCT GCCCGAAACA TAATGGCAGT AAACAAATCC ACGAATACCA ACTCGCCCTG 
TGCCACCAAC CTAAGCCCGA GGAAATTATC CCTCTGCTTG GCGATGTTAA AGACTTCGAA 
GAATACGTGT TTTGCGGTTA TGGCGAGCCC ACTTTAAATC TTCCAACGCT ACTCACTGTG 
GCAAAAGAGA TCAAACGCAG GGGCGGACGA GTACGGATTA ATACCGATGG TTTAGGCAAT 
CTGGTCCATA GGCGCAATAT TCTGCCAGAA TTTGCTGACT GCGTTGATAG CTTATCGATT 
TCACTCAATG CGGATAATGA AGCAGCCTAT ATTGAACACT GCCGCCCAAA ACTCGCTGGT 
TCCTACGCCG CCGTGCATGC CTTTATCGCC TTGGCGCCAC ACTATATTGA AACAGTACAA 
GTCTCCGCCA TCGAAGGATT AGCGGGCGTC GATATTGATA TTTGCCGTGA ACAAGTGGAG 
TCCTACGGCT GTGAATTTAA GCATCGTGTA TTAGGCGCTT TAGGCTAA 

 

Protein sequence

MSEHLHKQHL DNSHVVTTET LANGHITDEV CTNETCATET LVYDIRRSRY LNITGRCTLR 
CAFCPKHNGS KQIHEYQLAL CHQPKPEEII PLLGDVKDFE EYVFCGYGEP TLNLPTLLTV 
AKEIKRRGGR VRINTDGLGN LVHRRNILPE FADCVDSLSI SLNADNEAAY IEHCRPKLAG 
SYAAVHAFIA LAPHYIETVQ VSAIEGLAGV DIDICREQVE SYGCEFKHRV LGALG