| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3528 |
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| Symbol | |
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| ID | 5371816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4194476 |
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| End bp | 4195687 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640831788 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001367718 |
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| Protein GI | 153002037 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAGA CTCTACTGAG GAGAACATCT CCTTTATTAA TTTTGCTGCT ATTTGGCTTA
GGCGCAAAAA TATTAATGCA AACCAAGGAA GCGCCAGAAC AAAAACCTGA AGAGATGCCC
ATTCCTATCG TTGATGTGAC GCAAGTGACT CAGCAAACGG TATCGCTAAA CTTACCTTCC
TACGGTGTGG TTAATCCAAA ATATAAAACC CAACTGGTGA CCGAAGTTCA AGGCAGAATG
CTGACCATTT CCCCTAATTT TGTTGCGGGC GGCATAGTCA AGAAAGGCGA ACAACTCGCG
CAGATCGAGC CCTCAGATTA CGAGGCTGAT TTAATGCAAG CCGAAGCGAC ACTGGCCCAA
GCCACCGCTG CACTGAACGA AGAAATTGCC CGCGGTGAAG TCGCTAAAAT CGAATTCAAA
GGCTACGACA AAGGCTTACC CCCAGAGTTA GGTCTGCGTA TTCCACAGCT TAAAAAAGAG
CAAGCCAACG TTAAATATGC GCAAGCAGCA CTGGCGCGTG CCCAACGTAA CCTTGAGCGC
ACGGTTATCC GCGCCCCCTT TGATGGCATA ATCAAAGCGC GCAATGTCGA TTTAGGTCAG
TATGTTAGCT TAGGTACAAA TCTAGGAGAA CTCTACGACA CTAGTGTTGC TGAAATCCGC
TTACCGATTT CCAATGACGA TCTAGCCTAT TTAGAATCGG TTGATAATCC CGATACTCAA
GTGACGCTGA GCGCCTCTTT GGCAGGTAAA GAAAATACTT GGGATGGCAA TATTATCCGT
AGCGAAGGCG TGATCGATGC TGAAAATCGC ATGGTGTATT TAGTCGCTGA AATCAAAGAC
CCGTACCTGC GCGCCAATAA AGTTGCCGGC AGCTTGCCGC TTAAATATGG CAGCTTCGTC
AATGCAGTCA TCAAAGGTCG CACCGTCGAT GGCATAGTTA AACTACCCCG CCATGTGGTT
CGTAACGATC ACGTCGCCTT AGTGAATGAC AAAAATATTG TTGAAATGCG CCATGTAAAT
ATCGTTCGTA GCGATCTCGA CAATGTGTAT ATCAAGGACA GTCTAAAAAC GGGCGAGCGC
GTCGCCACCA CTCACTTCAA CAGCATGGCA AACGGTCAAC TGGTCAAGGT CTTAGGTGAA
GCGGCATTGC CGACTAAGAC ACCAAAAGAA GACACGCCTG AGTCGAGTCT TGCGGCCACT
GGAGTGAAAT AA
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| Protein sequence | MMKTLLRRTS PLLILLLFGL GAKILMQTKE APEQKPEEMP IPIVDVTQVT QQTVSLNLPS
YGVVNPKYKT QLVTEVQGRM LTISPNFVAG GIVKKGEQLA QIEPSDYEAD LMQAEATLAQ
ATAALNEEIA RGEVAKIEFK GYDKGLPPEL GLRIPQLKKE QANVKYAQAA LARAQRNLER
TVIRAPFDGI IKARNVDLGQ YVSLGTNLGE LYDTSVAEIR LPISNDDLAY LESVDNPDTQ
VTLSASLAGK ENTWDGNIIR SEGVIDAENR MVYLVAEIKD PYLRANKVAG SLPLKYGSFV
NAVIKGRTVD GIVKLPRHVV RNDHVALVND KNIVEMRHVN IVRSDLDNVY IKDSLKTGER
VATTHFNSMA NGQLVKVLGE AALPTKTPKE DTPESSLAAT GVK
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