| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3491 |
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| Symbol | lysS |
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| ID | 5373367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4150123 |
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| End bp | 4151625 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640831751 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001367681 |
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| Protein GI | 153002000 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAC AAGTAATTGA TGAGAACAAA CTGATCGCCG AGCGCCGTGC CAAGCTAGAA
AGCATCCGCC CAAACTGTAG TGCTAATGCG CATCCAAATA CCTTCCGTCG CACCCATAAA
GCGGCTGAAC TGCAAGCACA GTATGGTCAA AACACTAAAG AAGAACTCGA AGCCTTAGGT
TTTAAGACCA GCATTGCTGG CCGCATCATG GCAAAACGTG GTCCTTTCTT AGTGATCCAA
GACGTGTCTG GCCGTATTCA AGCCTATGCT GAAAAAAGCG TACAAGCTGA TTTGAAAGAG
CGTTTTCAAG GTCTGGATAT CGGTGACATT ATCGGTGTAA CCGGTCAGCT GCATTTGTCT
GGTAAAGGCG ACTTATATGT CAACATGGAA CAGTACGAGC TACTGACCAA GGCGCTGCGT
CCATTGCCTG CGGACTATTA TGGTCTAGCC GATCAAGAAA TGCGCTATCG TCAACGTTAC
GTGGATCTGA TCGTTAACGA AGATTCGCGC AATGCCTTCA TCATGCGTTC TAAAGTGGTT
TCTGCAATCC GTAACTTTAT GATCAAAAAA GAGTTTATGG AAGTTGAAAC CCCTATGATG
CACGTGATCC CAGGTGGTGC TTCGGCCCGT CCTTTCATCA CCCATCACAA CGCCTTAGAC
ATGCCAATGT ACCTGCGTAT CGCGCCAGAA TTATATCTGA AGCGTTTAGT GGTTGGTGGT
TTTGAGCGTG TGTTCGAAAT CAATCGTAAC TTCCGTAACG AAGGTCTGTC GCCACGTCAT
AACCCAGAAT TCACTATGAT GGAATTCTAT ATGGCTTATG CAGACTACAA AGATCTGATG
GACTTAACCG AAGAAATGCT CAGCTCGATT GCTATCGAAC TGCTTGGCAG TGCGCAAATG
CCCTACGGCG AGCACACAGT CGATTTCGGC GGCCCATACG CACGTTTAAG CATGTTAGAA
GCGATTCAGA AGTACAATCC TGATAACGCG ACTATCCAAG CTATGACCTA TGAGCAAGTG
AAAGATGTTG AATTCATGCG TGATTTAGCG AAAAGCTTAG GCATGAAGAT TGAAAAGTTC
TGGACTTGTG GTCAGCTACT TGAAGAAATC TTCGGTGAAA CTGCTGAATG GCAATTGATG
CAACCGACGT TCATCACTGG TTATCCAGCA GACATTTCAC CACTGGCACG TCGTAACGAT
GACAACCATT TCATCACTGA CCGTTTCGAA TTCTTCATCG GTGGCCGCGA AGTGGCTAAC
GGCTTTAGCG AGCTGAACGA TGCAGAAGAT CAAGACAACC GCTTTAAAGC GCAGGTTGAC
GCGAAAGATG CCGGCGACGA TGAAGCTATG TTCTACGATG CAGACTATAT CACTGCACTA
GAGCACGGTT TGCCACCAAC GGCAGGTCAA GGTATTGGTA TCGACCGATT AGTGATGTTG
TTCACTAACA CTCATACTAT CCGTGACGTG ATCCTGTTCC CAGCGATGCG CCCACAGGCG
TAA
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| Protein sequence | MTEQVIDENK LIAERRAKLE SIRPNCSANA HPNTFRRTHK AAELQAQYGQ NTKEELEALG
FKTSIAGRIM AKRGPFLVIQ DVSGRIQAYA EKSVQADLKE RFQGLDIGDI IGVTGQLHLS
GKGDLYVNME QYELLTKALR PLPADYYGLA DQEMRYRQRY VDLIVNEDSR NAFIMRSKVV
SAIRNFMIKK EFMEVETPMM HVIPGGASAR PFITHHNALD MPMYLRIAPE LYLKRLVVGG
FERVFEINRN FRNEGLSPRH NPEFTMMEFY MAYADYKDLM DLTEEMLSSI AIELLGSAQM
PYGEHTVDFG GPYARLSMLE AIQKYNPDNA TIQAMTYEQV KDVEFMRDLA KSLGMKIEKF
WTCGQLLEEI FGETAEWQLM QPTFITGYPA DISPLARRND DNHFITDRFE FFIGGREVAN
GFSELNDAED QDNRFKAQVD AKDAGDDEAM FYDADYITAL EHGLPPTAGQ GIGIDRLVML
FTNTHTIRDV ILFPAMRPQA
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