| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3478 |
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| Symbol | |
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| ID | 5371783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4129531 |
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| End bp | 4130136 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640831738 |
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| Product | membrane lipoprotein lipid attachment site |
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| Protein accession | YP_001367668 |
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| Protein GI | 153001987 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
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| TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0966746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACTGA CTATGAAACA ATTTAAACTG ATTTTTGTGC TGGCTGCCGT TATGGGTCTG
GCTGCATGTC AATCTAAAGT CGAATATGGC GATGCCACCG AAGTTGAAAC CGTCAATGAG
AACTTTGGCT CAACGGATCT ACAAGCTATT GCAGCCAAGA TGGTGGATAG CATGATGACT
TTCCCTCCTA TCGTGGCCAT GACAGCCAAT AGCCGTCCGA TTTTATTTGT CGACAGCATC
AAGAACAAAA CCTCAGAGCA TATTGATACT GAGTCTGTTA CTGACTCTAT CAGCAACAAA
CTATTGCGCT CAGGCAAGTT CCGTTTTATC GACATGACTA AAGTAGATTC AGTCCGTAAG
CAATTGGATT ACCAAAACAA CACTGGCATG GTTGATCCAT CAACCGCCAT CAAGTTTGGT
CGTCAAATCG GCGCGCAATA CATGTTATAC GGCAATTTAT CTAGCATAGT TAAGCAAGAC
GGTAGCACTA AAGACGTGTA CTACAAGATG ACAATGCGTT TAATGGATTT AGAAACTGGC
CTGATCGAAT GGTCTGATGA AAAAGAAATC CGTAAGATGA AGTCTAAGTC TTTCTTAGGC
ATGTAA
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| Protein sequence | MELTMKQFKL IFVLAAVMGL AACQSKVEYG DATEVETVNE NFGSTDLQAI AAKMVDSMMT
FPPIVAMTAN SRPILFVDSI KNKTSEHIDT ESVTDSISNK LLRSGKFRFI DMTKVDSVRK
QLDYQNNTGM VDPSTAIKFG RQIGAQYMLY GNLSSIVKQD GSTKDVYYKM TMRLMDLETG
LIEWSDEKEI RKMKSKSFLG M
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