| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3477 |
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| Symbol | |
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| ID | 5371782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4128070 |
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| End bp | 4129473 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640831737 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001367667 |
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| Protein GI | 153001986 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3014] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0100527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGT CTTTGGTTAC ACCTTTATCT CGCGCTTTTA TCGCCCTCGC TTTGGCAATG
GGGTTGGTGT TAAGTTTATC GGGCTGCGCC TACAACAGTA TTTTTATTAA TTACCCTTCA
CAGATTGAAC CACTCAAACA AGAGTTGAAT AGTGCAACAC CCTTGGCCGA TATCGACAAA
CTTGCCAGTA ATATCAATGG CAACGATGGC CTACTCTATG CTCAAGAAGC GGGCCGTATT
GCTCAAGTCG CCGGCGATTT TGCGGCCAGT AAAAAGTACT ACCAACAAGC GGTCGATGCT
TACACCGCCT TTGATGATAA GGCCAAAGTC AGCGTCAGCG ACATTAGTGC CACAGCCAGC
AGCTTAGTGT TAAACGACAA TGCGATTCCT TACCGAGGTC CTGGGTATGA ACGCATCATG
CTGCACCAAT ACCAAGCGCT GAATTATTTA TTTAGTGGCG ATTACCAAGG CGCTTTAGTC
GAAGTTCGTC GCAGTAACGA GTTACAAAGC AGCGAGCAAG AGCGCTATCA AAAATCGCAA
AAGTCAGTGC AAGCCATGGC GAACGGGACT ATCGATGCCG AGGTCAACAA ACTAGGTCAA
GCCGCAGGCA CTGTGACGAG TTCTTTCTTA AACGCTTACA GCTATTACAC CACTGGCGTA
TTACATGAAG TACTGGGTGA GCCGAACGAT GCCTATATCG ATTATCGTAA AGCGGCACAA
ATCACCCCAA ACAACACCTA TTTACAGCAA GATCTGGTGC GTCTCGCCAA GCAACTCGGC
ATGCCGCAAT ATGATGAGTT TAAACGTCGT TGGGGCGATG CTAAATTGCC TAATCCCAAA
GATGGCCAAG TGATTTTGAT GGTCGAGCGC GGCTTTGTGC CCGCCAAGCA AGCCCTTACC
GTACCTTTTA CTATCCATGG CAATTGGCAA ACCGTGTCGC TAGCCACTTA CATGCCAAAC
AATACTTTTG TGCCAGAGAC GCAAGTGCAA GGTTTAGGTA CAGTGCTGAA AACTGAACCT
ATTGCCAATA TCGATGCCTT AGCCATCACA GCACTCAAGG AAGATCTGCC CGCAACCTTG
GTTCGCCAAG TCGCACGTGT CTATGCCAAA TCTGAGATGG CCTATCAGGT TGGAAAGAGT
GGCAGCCCCG GAAATAATGC CGCCGATATT GGCAGCATAG CGATGCAGAT TTTTAACGTA
GTAACAGAGC AAGCGGATCG CCGTAGTTGG CTGACGCTGC CTAAACAAGC ACAGATCGGG
CGGCGTTATT TGAGTGCAGG TGAATACACT TTGCAGTTAG ATAAAGCGCC ACCGGCAAAA
ATTGACGTTG CAGCAGGCAA AACCACCTTA GTCTGGGCAA TTGATACTGG TAATTACACC
CGAATTTATT CAATAATCAT TTAG
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| Protein sequence | MKLSLVTPLS RAFIALALAM GLVLSLSGCA YNSIFINYPS QIEPLKQELN SATPLADIDK
LASNINGNDG LLYAQEAGRI AQVAGDFAAS KKYYQQAVDA YTAFDDKAKV SVSDISATAS
SLVLNDNAIP YRGPGYERIM LHQYQALNYL FSGDYQGALV EVRRSNELQS SEQERYQKSQ
KSVQAMANGT IDAEVNKLGQ AAGTVTSSFL NAYSYYTTGV LHEVLGEPND AYIDYRKAAQ
ITPNNTYLQQ DLVRLAKQLG MPQYDEFKRR WGDAKLPNPK DGQVILMVER GFVPAKQALT
VPFTIHGNWQ TVSLATYMPN NTFVPETQVQ GLGTVLKTEP IANIDALAIT ALKEDLPATL
VRQVARVYAK SEMAYQVGKS GSPGNNAADI GSIAMQIFNV VTEQADRRSW LTLPKQAQIG
RRYLSAGEYT LQLDKAPPAK IDVAAGKTTL VWAIDTGNYT RIYSIII
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