| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3472 |
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| Symbol | |
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| ID | 5371529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4122116 |
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| End bp | 4124728 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640831732 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_001367662 |
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| Protein GI | 153001981 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0137942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATG TTAATAAGTT AACGGCGATT TCTTTAGCTG TCGCAGCAGC TTTGCCTATG
ATGGCAAGCG CAGATGTGAT GATTACCGAA TATGTTGAAG GTAGCGCAAA CAATAAAGCA
ATTGAACTGT ATAACAGCGG CGATACGGCA ATTGATCTCG CGGGTTATAA ACTGGTTCGT
TATAAAGATG GGGCAACTGT TGCATCAGAT ATGGTGGCAT TAGATGGCCA ATCCATTGCG
CCTAAAACGA CTAAAGTCAT TTTAAATTCT AGCGCTGTGA TCACGCTTGA CCAAGGTGTT
GACAGTTACT CTGGCAGTTT AAGTTTTAAT GGTGGTGATG CGGTCGCACT CGTTAAAGAT
GATGCGGTTG TCGATATTAT TGGCGATGTA CCAACACCAA CGGGTTGGGG ATTAGACGTT
ACCCTAAAAC GTAAATTAGA TGCGTTAGTG GCGAATACGG TATTTAATGC CGCCCAGTGG
GAACAATTAC CTAAAGATAC CTTCTCAGGA TTAGGTTATC TAGAAGCCCC AGCAGAGCCA
GAAGTGCCGC TCTTTAGCTG CAGCGGCGCT AAAATAGTGC CGATTTATCA AGTACAAGGT
GCGGGTGAAT CTAGCCCTTA CGTTCCAGAA GGTGCATTTG AGTCTGAAGC TGAAGTTACA
GTGCGCGGTG TCGTGACTGC CCGTGGTGAA AGCTTGTTTA AAGGTTTTTA TCTACAAGAA
GTGAAAGGTG ATAACTCACC GTATACCTCT GATGGTGTGT TTGTATTCTT AGGTGAAGCG
GTACCTGAAG CGATTCAACC TGGGGTTGAA GTTTGTGTAC AAGGTAAAGT GAAAGAATAC
TTTGGCTTAA CTCAAATCGA TATTAAAGCC GATAAGAAAT TTGAAGTCGG CGCTAAGGGT
GAAGTTCCAG TTGCCGCGCC TTTCTATGTC GCCGATGGCG AAACCTTAGC GCAAGCATTA
GAGCGTTATG AAGGCATGAA TGTGGCTTTA GATGCGGGCA GCGATCTTAA GATCAGCCGT
ACCTTCAGCT ATGACTACGC AGGCCGTCGT AATAACATGC TAGTGTCTTA TAAAGAACCG
CTAATGAAGT CGACACAGCT TTATCCTGCG CTTTCTGCAG AAGCGACTGC GTTAGTTAAA
TCTAACCTCG AAAACCAACT CTTTATCGAA TCTGATTACA AACCTGCCGA CGGTGTAATT
CCATACTTCC CTGATTTCAA TGTGGAAACG GGCTATATCC GTGTGGGCGA CCAACTGACT
AACCTGCAAG GCGTGATTGG TTACAGCTAC GGTGCTTATC GTTTAGTGGC AACGAACACT
ATTACAGCGG GTGATTTTAT CCGTGGTGAT GATAGAACTG ATGCCCCAAG CGTCGCCACT
AAGGGCGATC TGCGCGTGGC TAGCTTTAAC GTGTTGAACT TCTTTAACGA TGTTGATGGT
GGTGATACCA ATCCATCAGG TAGTAACCGT GGCGCGCTAA CGCTGGAAGA AATGGTGCTA
CAACGCACTA AAATCGTTAG CGCTATTACT GCCATGAACG CCGATATCGT CGGTCTGATG
GAAATTGCCA ACAACGGTTT TGGTGAGAAG AGTGCGATTA AAAACTTAGT CGATGCACTG
AACGAGAAGC AAACGCCTGA AAACGCTTAT AGCTTTGTTG AAATCACCGA CGCTGACAAG
TATGACGGCA AGTACTTTGG CACGGATGCT ATCACTGTGG GCATGTTATA CCGTGGCGGC
AAAGTGACCT TAGCTGGTGC TGCTCAAGCT ATCGATACTC CTGAGCAACA TGCCAGTGCT
GGCAGCGTGA CTCGTACTAA AGATGGCAAA ACTGAGACAA ATCCAGGTAA CGATGCTTAC
CAACGTCACA GCTTAGCGCA AACCTTTAAA ATCCATGATG AGTCGCTGAC CGTAGTCGTT
AACCATTTGA AATCTAAAGG CTCAGGCTGT TTAGAAGATT GGGCTAACTT TGAAGAGTCA
GTCGATCCTG CCGATCAACA GGGCAAGTGT AATGCTTTCC GCGTATCTGC TGCCAAAGTC
TTGGGTGAAA CGCTAAAAGA CGTGAAGGGC GACTTACTGA TCATCGGTGA TATGAATGCC
TACGGCATGG AAGATCCTAT CCGTGTGCTG ACCGACTTTG ATGCGAGCAA GTCAGATCGT
GACATCATGA CCGCTTCGTG GACGACGCTC GATGGCAAAG TATTTGAACG CCAAGGTAGC
AAGATTGAAA AAGGTTATGG CCTGATCAAC TTGAACACGA AAGCCCACGG TGCAGGCACT
TACTCTTACA GCTATAACGG CGAGCTAGGC AACTTAGATC ACGCTTTAGC CAATGCTAGC
TTAGCCAAAC GTTTAGTGGA TATTGAAGAT TGGCACATCA ACTCAGTGGA ATCTAACCTG
TTTGAATACG GTAAGAAGTT CTCTGGTGAT CTGGCTAAAT CTGAAAATGC GTTCTCTGCA
TCGGACCACG ATCCTGTGAT CGTTGCCTTA AGCTACCCAG CGCCAGTAGT GCCACCAAAA
CCTGAGCCAA CGCCTAAAGA TGATGGCGGT GCTTTGGGTT ATTTAGGTTT AGCACTGATG
TCCTTGTTTG GTTTACAACG TCGTCGCCGT TAA
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| Protein sequence | MDNVNKLTAI SLAVAAALPM MASADVMITE YVEGSANNKA IELYNSGDTA IDLAGYKLVR
YKDGATVASD MVALDGQSIA PKTTKVILNS SAVITLDQGV DSYSGSLSFN GGDAVALVKD
DAVVDIIGDV PTPTGWGLDV TLKRKLDALV ANTVFNAAQW EQLPKDTFSG LGYLEAPAEP
EVPLFSCSGA KIVPIYQVQG AGESSPYVPE GAFESEAEVT VRGVVTARGE SLFKGFYLQE
VKGDNSPYTS DGVFVFLGEA VPEAIQPGVE VCVQGKVKEY FGLTQIDIKA DKKFEVGAKG
EVPVAAPFYV ADGETLAQAL ERYEGMNVAL DAGSDLKISR TFSYDYAGRR NNMLVSYKEP
LMKSTQLYPA LSAEATALVK SNLENQLFIE SDYKPADGVI PYFPDFNVET GYIRVGDQLT
NLQGVIGYSY GAYRLVATNT ITAGDFIRGD DRTDAPSVAT KGDLRVASFN VLNFFNDVDG
GDTNPSGSNR GALTLEEMVL QRTKIVSAIT AMNADIVGLM EIANNGFGEK SAIKNLVDAL
NEKQTPENAY SFVEITDADK YDGKYFGTDA ITVGMLYRGG KVTLAGAAQA IDTPEQHASA
GSVTRTKDGK TETNPGNDAY QRHSLAQTFK IHDESLTVVV NHLKSKGSGC LEDWANFEES
VDPADQQGKC NAFRVSAAKV LGETLKDVKG DLLIIGDMNA YGMEDPIRVL TDFDASKSDR
DIMTASWTTL DGKVFERQGS KIEKGYGLIN LNTKAHGAGT YSYSYNGELG NLDHALANAS
LAKRLVDIED WHINSVESNL FEYGKKFSGD LAKSENAFSA SDHDPVIVAL SYPAPVVPPK
PEPTPKDDGG ALGYLGLALM SLFGLQRRRR
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