Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3457 |
Symbol | |
ID | 5370896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4104725 |
End bp | 4105570 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640831717 |
Product | ApbE family protein, putative |
Protein accession | YP_001367647 |
Protein GI | 153001966 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000973965 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATACGTC GCGCTAAACC CTTACTCGGG ACTTTGGTGG AAATTGCCGC CGAGTCACTG CCACATTCTG GCAGTGAGAT CCCACTTGAG GATAAAGCCT TAGAAGCCGC GATGACAGCG GCTTTTTCAC GTGTGACGCA TATTGGTCGG TTACTGAGTT TTCATCAGCA AGACAGTGAG TTAAATCAGC TAAATCGCCA GCCAGGGACA TGGATTCGTG TAAGCCAAGA CAGTTTACGA GTGCTCAAGT TGGCTAAGTG GCTAGGCAAG GCGAGCAACA ACTTGTTCAA TTGTACTGTC GGCGGGGAAA TGATGTCCCG AGGTGCTTTA CCTGCCTATC TTGGTATGCC TTTGTTATTG CAAGGTGAGT GGCAAGATAT TGAAATAAAA GATAATCAAG TACGATTAGC TAGGCCACTC ATTTTAACCT TAGATGGCAT CGCCAAAGGT TATGCGGTTG ATATGGCGGT GAGTGAGCTG CGCCGTGCGG GCGTTGGCGG TGGTTGGGTG AATGCCGGTG GCGATTTAAG AGTCTTCGGC AGTGCCTCTT TAAATGTACT CTGCCGCGGC CCAAAGGGAT TGAGCCAAAA GATCTGCGTG AGCAATATGG CGCTGGCAAG TTCGCGGGTG TCACAAACCT TAAGCCATGA TTATCCTGCG TTATTACTGC CCACGGGCAA TGTTACTGAT GTGAATATCG ATCTTGAAAG TGAACGTATT GTCAGTGTGA GTGCGCCCTT TGCTTGGCGC GCCGATGCCT TGACTAAGGT TGCGGGTTAC CTAAGCTCTG ACTCCGCCGC TGACAAAATT GCTCACTTAG GTGGTCGATT AGTCAGTTTT GAATAA
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Protein sequence | MIRRAKPLLG TLVEIAAESL PHSGSEIPLE DKALEAAMTA AFSRVTHIGR LLSFHQQDSE LNQLNRQPGT WIRVSQDSLR VLKLAKWLGK ASNNLFNCTV GGEMMSRGAL PAYLGMPLLL QGEWQDIEIK DNQVRLARPL ILTLDGIAKG YAVDMAVSEL RRAGVGGGWV NAGGDLRVFG SASLNVLCRG PKGLSQKICV SNMALASSRV SQTLSHDYPA LLLPTGNVTD VNIDLESERI VSVSAPFAWR ADALTKVAGY LSSDSAADKI AHLGGRLVSF E
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