| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3453 |
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| Symbol | |
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| ID | 5370641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4100182 |
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| End bp | 4101000 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640831713 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001367643 |
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| Protein GI | 153001962 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTATTAA ATCATGAGCT AGAAGGCTTT AAGGACAGAC AAATGCGTAC GGTTTATCAT
CCCCTTACGG CAGAGCAAGA GCCAGTTGCG GATATCTTCT TTAACTATGA AGCTTTCCTG
CCTAATACGG TGACGCCTAA GCATCAACAC ACATGGGGAC AATTACAGTT AATCAGCGGT
GGCATCATGG AATTACATGC CGCTGGGCAA CGGTTTTTAT CGCCGTCGCA ATATGCGATT
TGGGTTCCTG CGGGGATAGA GCATGAAAGT TATACTCGGC GCAGTATCCA TTATTGTTCG
ATGAATATCG TTGCCGAGCG AGCTGCGGCG TTTCCCCTAG AGACCTGTTT GTTAGCTGTG
ACTCCTATTG CCCAATCGAT CGTTAACGAT CTGCGAGAGC GGCAAGTCAG AGTGGCAAAC
TCGGCGGCGG ATAAGCGCCT CGTTGAGGTT TTGCTCGATC AGCTCACTAT CGGCCAAGCC
CTGCCGCAAT TTTTGCCCAC CGTTTCAGAT AAACTGTTAC AGCCGCTGTT GTTGGCACTC
GAAGCCGATC CCGCGAGTCC TAAGACCTTT AAATCTTGGG CAAGTGAATT ACATACCACA
GAGCGTACCT TAGCCCGTCG TTGCCAAGAA GCGCTGGGGA TGAGTTTTAC CGAGTTAAGG
CAAAGGCATA AGTTTATCTA TTCATTACAA TTGCTGCGTC AGGGATTAGC GATCAAAGAG
GTAGCATTAA CGCTCGGCTA CAACCAAACC TCACCTTATA TTGTGATGTT TAAAAAGTAT
GCCCAGTGTT CGCCAGAGCA ATATCGCCGT CGATTGTGA
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| Protein sequence | MLLNHELEGF KDRQMRTVYH PLTAEQEPVA DIFFNYEAFL PNTVTPKHQH TWGQLQLISG
GIMELHAAGQ RFLSPSQYAI WVPAGIEHES YTRRSIHYCS MNIVAERAAA FPLETCLLAV
TPIAQSIVND LRERQVRVAN SAADKRLVEV LLDQLTIGQA LPQFLPTVSD KLLQPLLLAL
EADPASPKTF KSWASELHTT ERTLARRCQE ALGMSFTELR QRHKFIYSLQ LLRQGLAIKE
VALTLGYNQT SPYIVMFKKY AQCSPEQYRR RL
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