| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3440 |
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| Symbol | |
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| ID | 5373808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4084261 |
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| End bp | 4084770 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640831700 |
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| Product | S-ribosylhomocysteinase |
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| Protein accession | YP_001367630 |
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| Protein GI | 153001949 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1854] LuxS protein involved in autoinducer AI2 synthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.232705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTAC TTGATAGCTT TACCGTTGAT CATACTCGAA TGAATGCCCC AGCGGTTCGT
GTTGCTAAGC ATATGAGCAC GCCAAAGGGT GATGCGATTA CAGTATTCGA TCTACGTTTT
TGCGCACCGA ATAAAGATAT TCTCAGTGAG CGTGGTATTC ACACTCTGGA GCATTTATTC
GCTGGCTTTA TGCGTGACCA TTTAAATGGT AGCAATGTTG AGATCATCGA TATTTCGCCA
ATGGGATGTC GTACCGGCTT TTATATGAGT TTGATTGGAG AGCCGACTGA GCGCCAAGTG
GCCGATGCGT GGTTAGCTGC GATGGAAGAT GTGCTTAAAG TGGTTGAGCA GTCTGAAATC
CCTGAGCTGA ACGAATACCA ATGTGGTACG TATGAGATGC ATTCATTAGA GCAGGCACAA
GATATCGCCC GTAATATTAT TGCAGCTGGC GTAAGTGTGA ATCGCAATGA TGATTTGAAA
TTAAGCGACG AAATTCTAGG TAATCTGTAA
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| Protein sequence | MPLLDSFTVD HTRMNAPAVR VAKHMSTPKG DAITVFDLRF CAPNKDILSE RGIHTLEHLF
AGFMRDHLNG SNVEIIDISP MGCRTGFYMS LIGEPTERQV ADAWLAAMED VLKVVEQSEI
PELNEYQCGT YEMHSLEQAQ DIARNIIAAG VSVNRNDDLK LSDEILGNL
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