| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3438 |
|---|
| Symbol | |
|---|
| ID | 5373779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 4080305 |
|---|
| End bp | 4081639 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640831698 |
|---|
| Product | Na(+)-translocating NADH-quinone reductase subunit A |
|---|
| Protein accession | YP_001367628 |
|---|
| Protein GI | 153001947 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA |
|---|
| TIGRFAM ID | [TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0116179 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTACAA TTAAGAAAGG ATTGGAACTG CCTATAGCAG GCGGACCAGA GCAAGTTATC
CATAATGGCC CAGCCATTAA ACATGTAGCT ACTTTGGGTG AAGAGTATAT TGGCTTACGT
CCAACGATGA AAATCAAAGT GGGCGATAAA GTACAAAAAG GCCAGGTTCT TTTTGAAGAT
AAGAAGAATT TAGGCGTTAA ATATACGGCT TTAGCCAGTG GTACTATATT AGACATTAAC
CGGGGCGCCC AGCGTGTTCT GCAGTCTGTT GTCATTGAAG TGGAAGGAAA CGAAAGCGTT
GCCTTTGCTA AATATGATGC CACTGCACTC GATACGCTCG ACTCGCAGTT AGTCCGTGAC
AATCTGATCG AATCAGGTTT ATGGACTGCT TTGCGTACTC GTCCTTTTAG CAAAGTTCCT
GCTGTAGACT CTTCTGCTGC TGGTATTTTT GTAACCGCAA TAGATACTCA ACCTCTTGCC
GCTGATCCCG TTGTGGTGAT CCGTGAGCAT AAAGAAGATT TTGCTAATGG TCTTAAGGTC
TTAGCAAGAC TTACTGACGG TAAAGTTTAC CTTTGTAAAG CGCCTGGCGC TGATATTCCT
GCCGCAAACG CCCAAGTTGA AGAATTTGCT GGTGTGCACC CTGCAGGATT AGTCGGTACT
CATATTCACT TCTTATTGTC TGCCTCTGCA AAACGTACCG TTTGGCATAT TGGTTACCAA
GATGTAATAG CAATTGGTCA GCTATTTACG ACGGGTGAAC TCAATACCGA ACGTGTTATT
GCGATCGCAG GCCCTAAAGC GGCTAAGCCA AGACTCGTAC GCACTGTTGT GGGCGCGAGT
ATGACTGAAT TAACCGCAGG TGAAGCCTTA GATGGTAATG TTCGTCTGAT TTCAGGCTCT
GTTCTGAATG GTCGTACAGC CGTTGGCCCA CAAGGGTATT TAGGTCGTTA CCATGTTCAA
GTAAGTCTGT TAGAAGAAGG TACAGAGAAA GAATTTTTAG GCTGGGTATT ACCAGGCTCA
GACAAATATT CTATCACTCG TGCATTCTTA GGACATCTTG CTCCTTCTCG TCTGTTCAGT
ATGACGACCA GTACAGGTGG TTCAGACCGC GCTATGGTGC CAATTGGTAA CTATGAGCGT
GTAATGCCAT TGGACATTCT TCCTACTATG TTGTTGCGTG ACTTGATTTC AGGTGACTTT
GACGGTGCTG CCACGTTAGG CGCGTTAGAG TTAGATGAAG AAGATCTCGC ACTGTGTACG
TTCGTATGTC CAGGCAAGTA TGACTACGGT TCATATCTGC GTGACTGTCT AGATACGATC
GAGAGGGAAG GCTAA
|
|---|
| Protein sequence | MITIKKGLEL PIAGGPEQVI HNGPAIKHVA TLGEEYIGLR PTMKIKVGDK VQKGQVLFED
KKNLGVKYTA LASGTILDIN RGAQRVLQSV VIEVEGNESV AFAKYDATAL DTLDSQLVRD
NLIESGLWTA LRTRPFSKVP AVDSSAAGIF VTAIDTQPLA ADPVVVIREH KEDFANGLKV
LARLTDGKVY LCKAPGADIP AANAQVEEFA GVHPAGLVGT HIHFLLSASA KRTVWHIGYQ
DVIAIGQLFT TGELNTERVI AIAGPKAAKP RLVRTVVGAS MTELTAGEAL DGNVRLISGS
VLNGRTAVGP QGYLGRYHVQ VSLLEEGTEK EFLGWVLPGS DKYSITRAFL GHLAPSRLFS
MTTSTGGSDR AMVPIGNYER VMPLDILPTM LLRDLISGDF DGAATLGALE LDEEDLALCT
FVCPGKYDYG SYLRDCLDTI EREG
|
|---|
| |