| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3419 |
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| Symbol | |
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| ID | 5370441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4059362 |
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| End bp | 4060420 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640831679 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001367609 |
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| Protein GI | 153001928 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.516621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAATA AGTCAATCCA CGACTTATGC CTTGCAGAAA GCCAGCGCAT AAATACTAAG
ACGATAGGTA TCAAAATGAC AATGACGCTC CTTACATCAT TATTGGCTAT ACCCGTTTGC
TATTTAGCGC TTGCATCATT ATTGGTATGT ATACCCGTTA GAAAACAGCC TGTCGTTGAT
AGTCTGGATT TTGATGTTTT AAATGGTAAA GCAGATAACC TTCAACTAAG TGAGCAAACG
TATGCTTCGC GTAGCGGAAG TGAGTTGTTT TACAGATTTA TCGCCGGCAA GACGAATACG
ATTCTGGTTC TATTACATGG TTCTGGAGCG GAAGGTCGGT ATTTGCTGCA CCCCGCTCAA
AAATTATCCA TTGCAACTGA GATAAGTGTG GTTATTCCAG ATCTGCGTGG TCATGGTCGA
TCAGCAAAAA AGACATTGGG AGATATCGAT TATATAGGAC AGTATGAGGA TGACTTGGAG
GATCTTAGGC TGCATCTTAG TCAACAATAC CCTAATTCAT CTATCATTCT CGGAGGACAC
TCATCCGGTG GCGGTTTAGC GATAAAATAT GCAGGAGGAG ATCGTGTTGC ATTTGATGGA
TATCTGCTCC TCGCTCCTTA TCTTGGCTAT CGGGCACCAA CTGTAAGGCC AAATTCGGGA
GGATGGGTTC AGGTATCGAC TAGACGTTAT ATAGGATTGA CGATGTTAAA TAATGTTGGA
ATTAAGCTGT TTAACTCTCT ACCTGTGCTA TTTTTTAACC GCCCAAAAGA ATGGAGCGAC
CCATTACAGG CTGAAAGCTA CTCTTACAGG TTAAATGAAT CTTTTTCACC TCAAGCGTAT
GAAAAGAATC TGCAAAAAAA TAATAAACCT GTATTAGTCT TAGTGGGTGC AGATGATGAA
GCATTTTACG CAGAAAAGTT CGAAGCCGTT TTTAGTAAAA ATGCTCCTCA TGCGCTCGTC
AAAATAATCC CAAAGGTAAA GCATTTAAAC CTGCCAAGTA ATGAAGATAC GATCAACATT
ATGAGTAGCT GGATAAATAG TACCTATCAA GGGCATTGA
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| Protein sequence | MKNKSIHDLC LAESQRINTK TIGIKMTMTL LTSLLAIPVC YLALASLLVC IPVRKQPVVD
SLDFDVLNGK ADNLQLSEQT YASRSGSELF YRFIAGKTNT ILVLLHGSGA EGRYLLHPAQ
KLSIATEISV VIPDLRGHGR SAKKTLGDID YIGQYEDDLE DLRLHLSQQY PNSSIILGGH
SSGGGLAIKY AGGDRVAFDG YLLLAPYLGY RAPTVRPNSG GWVQVSTRRY IGLTMLNNVG
IKLFNSLPVL FFNRPKEWSD PLQAESYSYR LNESFSPQAY EKNLQKNNKP VLVLVGADDE
AFYAEKFEAV FSKNAPHALV KIIPKVKHLN LPSNEDTINI MSSWINSTYQ GH
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