| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3417 |
|---|
| Symbol | |
|---|
| ID | 5371453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 4056610 |
|---|
| End bp | 4057899 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640831677 |
|---|
| Product | xanthine/uracil/vitamin C permease |
|---|
| Protein accession | YP_001367607 |
|---|
| Protein GI | 153001926 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2252] Permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAAA AACTGTTCAA ACTGAAACAA AATCAAACGA GCCTCAAGCA GGAAGCGGTC
GCAGGTTTGA CAACATTTAT GACGATGGCT TACATCATTT TTGTGAATCC AATGATGTTA
GCCGATGCGG GCATGGACCA TGGGGCTGTA TTCGTAGCGA CTTGTTTGGC TGCGGCTGTC
GGCTGTTTAG TCATGGGCTT GATGGCGAAT TATCCTATCG CGCTTGCACC TGGGATGGGG
CTGAACGCCT TCTTTACCTA CACAGTTGTG GGCGAAATGG GTTACAGCTG GGAGACTGCA
CTTGGCGCGG TATTCCTATC GGGTATTTGC TTTTTAATCT TATCTTTAGT GCGCATTCGA
GAGTGGATTG TAAATAGCAT TCCCATGTCG CTGCGTATTG GTATTGCCGC TGGTATTGGT
CTGTTCCTTG CGCTGATTGG CCTTAAGAGT GCCGGTATTG TGGTGGCAAG CCCTGCAACC
TTAGTGACCT TAGGCGATAT CACTGCATTT CCGGCGGTGA TGGCTGTGTT AGGCTTTTTC
CTGATCATTG CTATGGTGCA ACGTGGAATG AAGTCGGCGG TTATCCTAAG TATCTTGATT
ATCACAGCGC TGGGATTAGT GTTTGGCGAT GTGCAGTATC ACGGCATTGT GTCTATGCCG
CCGTCGATCA TGCCAACATT TTTGAAGATG GATTTATCCC AAGTCTTTGA AGTCAGCATG
TTATCTGTGG TGTTTGCCTT CTTGTTTGTC GATCTTTTCG ATACATCTGG CACTTTAGTT
GCGGTTGCGC AGCGCGGTGG TTTCCTCGAT GAGAAGGGCC GTTTACCGCG ATTAAACCGT
GCCTTAACCG CCGACAGTTT AGCGACTATT GCGGGCGCCG CTTTTGGTAC GTCGACGACC
ACAAGTTATA TCGAAAGTAC GGCGGGAGTG AGCGCGGGTG GTCGTACTGG TTTAACGGCA
GTTGTCGTGG GATTACTCTT TATTGCTGCG TTATTCCTGT CGCCATTGGC GGGCATGATC
CCAGCTTATG CGACGGCGGG CACACTGTTT TATGTGGCAA TTCTGATGAT GTCAGGACTC
GTGCATGTCG AATGGGAAGA TTTGACTGAA GCCGCGCCGG TAGTCGTTGT GTGTATTTTA
ATGCCACTGA CGTTTTCTAT CGCAACAGGC ATCGCCTTTG GGATGATCTC TTACGCCGCA
ATCAAATTAC TCACAGGTCG TTTTAGCGAT CTCAATGTGG GCATTGTCGT CTTGGCTGCG
CTGTTTGTAG CTAAGTTTAT CTATGGCTAA
|
|---|
| Protein sequence | MLEKLFKLKQ NQTSLKQEAV AGLTTFMTMA YIIFVNPMML ADAGMDHGAV FVATCLAAAV
GCLVMGLMAN YPIALAPGMG LNAFFTYTVV GEMGYSWETA LGAVFLSGIC FLILSLVRIR
EWIVNSIPMS LRIGIAAGIG LFLALIGLKS AGIVVASPAT LVTLGDITAF PAVMAVLGFF
LIIAMVQRGM KSAVILSILI ITALGLVFGD VQYHGIVSMP PSIMPTFLKM DLSQVFEVSM
LSVVFAFLFV DLFDTSGTLV AVAQRGGFLD EKGRLPRLNR ALTADSLATI AGAAFGTSTT
TSYIESTAGV SAGGRTGLTA VVVGLLFIAA LFLSPLAGMI PAYATAGTLF YVAILMMSGL
VHVEWEDLTE AAPVVVVCIL MPLTFSIATG IAFGMISYAA IKLLTGRFSD LNVGIVVLAA
LFVAKFIYG
|
|---|
| |