Gene Shew185_3404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3404 
Symbol 
ID5370460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4042257 
End bp4043066 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content53% 
IMG OID640831664 
Productpeptidase M48 Ste24p 
Protein accessionYP_001367594 
Protein GI153001913 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000146898 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAA TGCGTTTAGG CTTAGTGGGT TTGGCGGTCG TGCTCGGATT ATCGGCCTGC 
GCAACCACGC AATCGCCAAC AGGGCGGGGG CAGACTTTGC TCTTTTCAGC GGCGCAGATG
CAGCAGATGG GTGATGCTTC TTTTGAAGAG ATGAAAAAGC AGCAAAAGGT GAGTAGCGAT
AAAAAGCTGA CGCAATACGT GAATTGTGTC GCTAATCGGG TAACAGCAGT GCTACCGGAT
CAAACCCAGC GCTGGGATGT CGTCTTGTTT GACTCTGAAC AAGTTAACGC CTTTGCACTG
CCGGGCGGCC ACATTGGTGT CTATAGCGGC TTACTTAAGG TCGCCAATGG TCCTGATCAG
CTTGCCACTG TGCTCGGTCA CGAAGTGGCG CACGTGTTGG CGCAACATGG TAACGAGCAG
GTTTCTCGCG GACAGTTAAC GGGCGTCGGT ATGCAAATAG CCGATGCGGC GTTGGGGGCG
AGTGGTGTGT CGAATCGCGA CTTATATATG TCGGCGTTAG GACTAGGTGC TCAGGTTGGG
GTGATTCTGC CCTTTGGCCG CGCTCAAGAG AGCGAAGCCG ATATCATGGG GTTAGAGCTG
ATGGCGCGGG CCGGTTTCGA TCCGGCGCAA AGTGTGACCT TATGGCAGAA CATGTCGAAG
GTAGGCGGCA GTCAAGGGCC GGAATTATTA TCGACTCATC CATCGAACAG TAATCGCATC
GCTCAGTTGC AACAACTGCA AGGGCAGATG CAGCCACTCT ATGCCAGTGC TAAAACCCAA
GTGAAGAATC AATGTGTGGC GCCGAAATAA
 
Protein sequence
MKSMRLGLVG LAVVLGLSAC ATTQSPTGRG QTLLFSAAQM QQMGDASFEE MKKQQKVSSD 
KKLTQYVNCV ANRVTAVLPD QTQRWDVVLF DSEQVNAFAL PGGHIGVYSG LLKVANGPDQ
LATVLGHEVA HVLAQHGNEQ VSRGQLTGVG MQIADAALGA SGVSNRDLYM SALGLGAQVG
VILPFGRAQE SEADIMGLEL MARAGFDPAQ SVTLWQNMSK VGGSQGPELL STHPSNSNRI
AQLQQLQGQM QPLYASAKTQ VKNQCVAPK