Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3394 |
Symbol | |
ID | 5372384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4028482 |
End bp | 4029690 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640831654 |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_001367584 |
Protein GI | 153001903 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGCGG CTGTTGAACA TAATGACATC GAACAGATGA GAGTCGCCAA TATCAAAATC GCCAGTATCA ATCTGTTTAA CTTTATTGAG CCGCCTTTGG CTTACTACGA CTTTGAAAAT ATCTATAGCC ATGGTCAGTG GCAGAAAAAG TGCCAATGGC TGAGTGAGTT TCTCACCCAT CGCCAGCCCG ATATTGTCGG ATTTCAAGAA GTATTTAGCC CTGAACCACT CAAACGTATC GCCAGCGTGC AAGGGCTAGC GCATTTTGCT GTTGTCGATG AACCTACCCT TATCAGTGAT TATATTTATC GTAGCCCTGT GGTTGCGCTT GCCTCCCGGT ATCCCATAGT GGAAATCAGC AGTGTCGAAC CTGGTGCACG CTTAGTGGCG GCGATGGGAT TATCGAGTGA ATTTGCCTTT AGCCGTAAGG TGCTGCGCGC AACCATTGAG GTGCCACACA TTGGTAAGTG TGATTTTTAT GTGGTGCACT TTAAATCTAA ACGCGCCGGA TTAGCCCTCG AGCCTAAGCT AATTGAACCT AAGCTATCTG AACATCAGCG ATTTGAAAAT CAGCCCCTAG GATTCGATAA CTCGGCGCCC GCAGCGAGCA TGAAACTGCA TTCAGAAACC CAATTACTCA CCGAGCAAGC CTTAGGCCGC TGGGCATCCA CCATGCAGCG CGGCGCGGAA GCTGCGTTAT TATTCAATGG CATATTAGTA CGCAGGCAAG CATCTAAATA TCCCGTCATT GTGATGGGCG ACTTTAATGA CAGCCTGACG ATGGGGGCTT TAGATGCGCT AACAATACAG GGCGAGAGTA TCCACAGTAA TGACATAAAA GCCGCTGGCC TTGGGCATTT ATCGGATGCG GCGTTAGCGG CGGTGTTTGC TCAATATCAA CTTAAGGATG CCTATGAGTT ATTTATCGAG GCCAACCTAT TTATTAATGC CAATCAGCAG GGCAGTTTAA CGGGTAATAC CGCTTTCCAT AGGGAACACA GAGCGGCGAC CCATTACTAT GGCCCCAAAG GTTCTGTGCT GGATTATATT TTGCTTTCGA GCGAGTTCGA TGCGAGCCAT GGCCGCAGTT TGGCTCAAGT GGTGGATTAT CAAACCTGCG ACAGGCACTT AGTCAGACCC GAATACGAGC GTGATGCCTA CAGTACTGAC CATGCGCCAG TGATTGTTGA GTTGGCGCTG CGGAGTTAA
|
Protein sequence | MAAAVEHNDI EQMRVANIKI ASINLFNFIE PPLAYYDFEN IYSHGQWQKK CQWLSEFLTH RQPDIVGFQE VFSPEPLKRI ASVQGLAHFA VVDEPTLISD YIYRSPVVAL ASRYPIVEIS SVEPGARLVA AMGLSSEFAF SRKVLRATIE VPHIGKCDFY VVHFKSKRAG LALEPKLIEP KLSEHQRFEN QPLGFDNSAP AASMKLHSET QLLTEQALGR WASTMQRGAE AALLFNGILV RRQASKYPVI VMGDFNDSLT MGALDALTIQ GESIHSNDIK AAGLGHLSDA ALAAVFAQYQ LKDAYELFIE ANLFINANQQ GSLTGNTAFH REHRAATHYY GPKGSVLDYI LLSSEFDASH GRSLAQVVDY QTCDRHLVRP EYERDAYSTD HAPVIVELAL RS
|
| |