Gene Shew185_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3390 
Symbol 
ID5372622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4024420 
End bp4025610 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content49% 
IMG OID640831650 
ProductPUA domain-containing protein 
Protein accessionYP_001367580 
Protein GI153001899 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATCA GAATCAAACT TAAACCCGGC CGCGAGAAGT CGCTCGAGCG TCGCCATCCT 
TGGGTATTTT CCAATGCTAT TCATAACATT AAGGGAAAAC CTGAAGCGGG TGAGACGGTC
GATGTGGTCG CTCATGATGG TCATTGGTTA GGTCGTGGTG CTTGGTCGCC TGAGTCGCAA
ATCCAAGTGC GGATTTGGAC TTTCGATCGA GAAGAAGAAA TTGATCGCGA GTTTTTTGCC
AGACGTTTAC AGCGGGCGCA AATTGGCCGT AACGATTTAA TTCGTGAGCA AGGCTTAACG
GGTTATCGTT TAGTGGCTGC TGAGTCCGAT GGTTTACCTG GGATCACCAT CGACAGATAC
GCCAATGTGT TGGTGTGCCA GTTACTGAGC ACAGGTGCTG ATTTATGGCG CGACACCTTA
GTTGAGTTAT TGGCCGAGCA ATATCCTGAT TGCGCTATCT ATGAGCGTTC CGATGTGGAT
TCCCGCAAGA AAGAAGGCCT GCTGCCTGTT ACGGGTTTAC TGCACGGTAC TCTGCCAGAA
ATGCCGGTGA TTATCGAAGA AAACGGCATC AAGATCGCCG TCGATGTGAT TAAAGGCCAT
AAAACAGGTT TCTATCTCGA TCAACGTGAT AACCGCGCCA TTGCCGCCCG TTTTGTGAAA
GATAAATCGG TATTGAACTG TTTCTGCTAC ACAGGCACCT TTGGTTTGTA CGCCGCGAAA
GCAGGCGCTG CCAGCATAGA AAACGTCGAT GTGTCTTCTT TAGCATTAGC GACGGCGCGC
CTCAATATGC AAGTGAACGG TTTGAGTGAT GACAATGTGC ATTACAATGA AGCCGATGTG
TTCAAGTTGC TGCGCCAATA CCGTGATGAG GGCAAGACCT TCGATGTGAT CGTGCTCGAC
CCACCTAAGT TTGCCGATAA TAAGGCGCAG TTAAATGGTG CTTGCCGTGG TTATAAAGAC
ATCAACATGA TTGCATTGCA GTTGTTGAAT CCGGGCGGGG TGTTATTGAC CTTCTCTTGC
TCGGGATTAA TGCCTGCGGA TCTGTTCCAA AAAATCGTGG CCGATGCGGC GCTGGATGCA
AAACGCGAAA TCCAGTTTAT CGAACGCTTA AGCCAAGCGA GCGATCACCC AATCGGTAGC
GCCTTCCCCG AAGGATTCTA CTTAAAAGGT CTAGTCGCAA GAGCTTGGTA A
 
Protein sequence
MAIRIKLKPG REKSLERRHP WVFSNAIHNI KGKPEAGETV DVVAHDGHWL GRGAWSPESQ 
IQVRIWTFDR EEEIDREFFA RRLQRAQIGR NDLIREQGLT GYRLVAAESD GLPGITIDRY
ANVLVCQLLS TGADLWRDTL VELLAEQYPD CAIYERSDVD SRKKEGLLPV TGLLHGTLPE
MPVIIEENGI KIAVDVIKGH KTGFYLDQRD NRAIAARFVK DKSVLNCFCY TGTFGLYAAK
AGAASIENVD VSSLALATAR LNMQVNGLSD DNVHYNEADV FKLLRQYRDE GKTFDVIVLD
PPKFADNKAQ LNGACRGYKD INMIALQLLN PGGVLLTFSC SGLMPADLFQ KIVADAALDA
KREIQFIERL SQASDHPIGS AFPEGFYLKG LVARAW